New model in OGS2.0 | DPOGS201937  |
---|---|
Genomic Position | scaffold527:+ 24840-32567 |
See gene structure | |
CDS Length | 2355 |
Paired RNAseq reads   | 910 |
Single RNAseq reads   | 2519 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA011625 (0.0) |
Best Drosophila hit   | calcium-independent phospholipase A2 VIA, isoform D (5e-93) |
Best Human hit | 85 kDa calcium-independent phospholipase A2 isoform a (5e-99) |
Best NR hit (blastp)   | PREDICTED: similar to phospholipase A2, group VI (cytosolic, calcium-independent) [Tribolium castaneum] (0.0) |
Best NR hit (blastx)   | PREDICTED: similar to phospholipase A2, group VI (cytosolic, calcium-independent) [Tribolium castaneum] (0.0) |
GeneOntology terms    | GO:0016787 hydrolase activity GO:0008152 metabolic process GO:0005813 centrosome GO:0005634 nucleus GO:0005737 cytoplasm GO:0016042 lipid catabolic process GO:0032049 cardiolipin biosynthetic process |
InterPro families    | IPR002110 Ankyrin repeat IPR002641 Patatin/Phospholipase A2-related IPR020683 Ankyrin repeat-containing domain IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase |
Orthology group | MCL12536 |
Nucleotide sequence:
ATGTTGAATTCAATATTTCGGGGTTTGCTTAACTTTGAAGAACCTCTAAATAAAGTAATA
GAAGTTCGTTCGGACAATTACATTTCAAGACCAATTCATTGTAGAGAAGATTCTATGTTG
CTTTACTTACCAAAAATACCCAATGATGGAAGAAATTCTAAAGATAAATATTATGAAATC
GTGCTGCATAAACCATTTACCGAAAGCTTACATCAGATGTATAGCTTATTTAGATCCGAA
AGTCGCGAAGAATGTGAAGAAAGATTTATTGTATTTAAAGAAAGAATTCCACTTTATGTC
AAAATAACCAAGGAATGTAATGTGGCAAGTCTTCAAAAGATATGTGACACGCTCTCAGAA
CATAGATCTTGGACGTTGGCTCACTTGGTTGCACACTATGGACTGTGTGAACTATTCAAT
GATCCAGATATACAGAAACAAATTGATGACATCGATCCCACCACTGGGATAACGCCATTA
ATGGTTGCAATTAAAAATAACAACATCAGAATGGTGCAGAGTCTACTGTCGTTAAATTGT
AGATTGGATGTAATTGATACAGAGGGCAACACAGTGTTCCACTATGCAGCGGCCAGTAAC
AAGGAAATTGTTAATGCCTTGACGGCAAAGACAATATCTTTCCTGAACAAGTATAATAAG
CAAGGCTATACGCCGTTGCACATGGCCTGCCTTGCGGATGCACCTGATTGTGTACGCGCC
CTTATACTGGCGGGGGCGGATGTTAATCTGTCGGCAACACCCAGAAGTTATAATACTAGT
ACAATACCCGGTATCGTGGGTGATGTGCTTCAAGACAATCAGCCGAAACTTTATCAGCAG
GACATGAAACGAGGCGGCACTCCTTTACACTGGGCTATATCGAGAGAGGTCGTGGAGGCG
CTAGCGAACAAAAACTGTGACATCAACGCTGTCAACTTTGATGGGAGAACCGCCCTTCAT
ATTATGGTTTTAAGGGGCAGATTGGAATGCGCTATTGCGTTACTGTCGAGGGCCGTCGAA
CATTCCATAGGGGATAACGAAGGGAACACACCATTACATCTAGCAGCGAAACAGACTAAT
ATAGCTATCGTCCAAGCGCTTGTAGTTTTTGGAGCGGAACTGGAAGCGAAAAATAAAGCC
GGGTTCACAGCGAGACACATCGTCCCTAAAGAAATGTCGAACAACAACTACGATAAGATC
CTGTATATACTGCACTCTGTTGGAGCCGAACGATGTTCGTCCAGCACTTCCGGTTGCGGT
CCTGGCTGCGCTGCCCGCGGTGAGTACAATGGGGTACCACCTCAGGCGGTCGCGCGCGCA
GCCACCAGGGAGATGGTCAGTGATATGCTCACAGCTGCAACCATGGCCCGCGCCGCGGCC
ATGAACGGCGACGAGAAGGTTGGACGACTACTTTGCTTAGACGGAGGGGGGATCCGTGGC
TTAGTGTTGGTCCAACTGCTGCTAAACCTCGAGGCTGCGGTGGGTAGACCTATCATAGAG
TGCTTCGACTGGGTCGCTGGCACCAGTACTGGGGGAATTCTAGCTTTAGCGTTGGCCACC
GGGAAGAGTTTGAGGGATTGCCAAAGGCTGTACTTCAGAATGAAGGAATACGCCTTCGTG
GGATCGAGACCGTATCCTTCGGAGGCTTTGGAGACAATTTTGAAAGAAAATTTAGGAACG
CAAACTGTCATGGCAGATATAAAGAAACCGAATTTAATGATACTGGCCGTTCTGGCGGAT
CGCAAACCAGTTGATCTGCATATCTTCAGGAACTACCAGTCCGCGCAAGAAATATTAAAC
GAGTACAACGGAACTACTAGTCCTCATGCTGAAGCTGGAGACCAATCTACTGTGGTGTTT
CTGGATGGTGGTCTGATGGGTAACAATCCAACTCTAGACGCGTTGACCGAGCTGGCGGAA
CTACGACTAGCGCTGGAAGGCACCGGCCAGCACGAGAAAGCCAAAAACACTTACCTCAAG
GTCGTAGTTTCCTGTGGAACTGGTCTCATTCCCGTTTCTAAATTGAAAGACATAGATGTT
TTCAAGCCAGAAAGTTTATGGGACACCGCTAGAGTGGCCTGGGGACTGTCTAACATTGGG
GGGTTGTTGGTGGATCAGGCGACACAGTCGGACGGCCGCGTAGTGGAGCGCGCTCGTTCC
TGGTGCTGGTCGCTCGGAGCCCCCTACTATCGGTTCGCTCCTCAGATGTCGTGGGACGTG
GCAATGGACGAACGACTCGACGAGCGGCTCGTCACAATGCTGTGGGAGGCCCACGCGTAC
ATGCGCAGTCAACGAGATAGACTCGTCGAACTCGCCACGCTACTGAGATCCCATGATATA
CCGATGTCCGGTTAA
Protein sequence:
MLNSIFRGLLNFEEPLNKVIEVRSDNYISRPIHCREDSMLLYLPKIPNDGRNSKDKYYEI
VLHKPFTESLHQMYSLFRSESREECEERFIVFKERIPLYVKITKECNVASLQKICDTLSE
HRSWTLAHLVAHYGLCELFNDPDIQKQIDDIDPTTGITPLMVAIKNNNIRMVQSLLSLNC
RLDVIDTEGNTVFHYAAASNKEIVNALTAKTISFLNKYNKQGYTPLHMACLADAPDCVRA
LILAGADVNLSATPRSYNTSTIPGIVGDVLQDNQPKLYQQDMKRGGTPLHWAISREVVEA
LANKNCDINAVNFDGRTALHIMVLRGRLECAIALLSRAVEHSIGDNEGNTPLHLAAKQTN
IAIVQALVVFGAELEAKNKAGFTARHIVPKEMSNNNYDKILYILHSVGAERCSSSTSGCG
PGCAARGEYNGVPPQAVARAATREMVSDMLTAATMARAAAMNGDEKVGRLLCLDGGGIRG
LVLVQLLLNLEAAVGRPIIECFDWVAGTSTGGILALALATGKSLRDCQRLYFRMKEYAFV
GSRPYPSEALETILKENLGTQTVMADIKKPNLMILAVLADRKPVDLHIFRNYQSAQEILN
EYNGTTSPHAEAGDQSTVVFLDGGLMGNNPTLDALTELAELRLALEGTGQHEKAKNTYLK
VVVSCGTGLIPVSKLKDIDVFKPESLWDTARVAWGLSNIGGLLVDQATQSDGRVVERARS
WCWSLGAPYYRFAPQMSWDVAMDERLDERLVTMLWEAHAYMRSQRDRLVELATLLRSHDI
PMSG