Genomic Position | scaffold1003:+ 15265-37886 |
---|---|
See gene structure | |
CDS Length | 1302 |
Paired RNAseq reads   | 6 |
Single RNAseq reads   | 30 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA005029 (2e-20) |
Best Drosophila hit   | CG34113, isoform O (4e-79) |
Best Human hit | PREDICTED: LOW QUALITY PROTEIN: hemicentin-2 (2e-14) |
Best NR hit (blastp)   | PREDICTED: similar to CG34113 CG34113-PP [Tribolium castaneum] (1e-88) |
Best NR hit (blastx)   | PREDICTED: similar to CG34113 CG34113-PP [Tribolium castaneum] (4e-87) |
GeneOntology terms    | GO:0003674 molecular_function GO:0005575 cellular_component GO:0008150 biological_process |
InterPro families    | IPR003599 Immunoglobulin subtype IPR013162 CD80-like, immunoglobulin C2-set IPR013783 Immunoglobulin-like fold IPR007110 Immunoglobulin-like |
Orthology group | MCL12328 |
Nucleotide sequence:
ATGTGCTCCATGAAGTGGCTCCGACTGCTTGTGATGCTGGCTGTCTGCTGTGCTCAAGAA
GGAGAATGGAACGAAGATGCGGAGGACTTAGTGTCAACAGTGGATGTAGATGCCGTGCTG
GGGCGTACAGCATCGCTTCCCTGTGACGTTACTCCAGATACAAATGAGGATAGAGTATAC
ATGGTGCTCTGGTTTCGAGCAGGGAAGAGTACCGGCGGAAAACCTATTTATAGCATTCCA
TGTGTCACCTTTCGTGTCGGGTCTATCGCGTTGCAGGGAGCGGAGTTTTTGCAGTGCCTG
GAACTTGCGACCCCAGGTGTAGGTTTAAGGGGCCCCTATCTAATGCGCGTTAAACACTCA
CCTCCACCGTCAAAGTTCCTCTTTCCACCGAATCAAATTTCAAAAGAACCTACTACGGCT
GTCTTCAAAGTACGTTCCAAGAATGAAATGTTATTAGTTCTGGACAGTTTTGACGTTCGT
GGAAGATCATTTAACAAAGCTTTACAATGGTCAGATCCTAATGTTTTTGGTCCACGGGCT
TATTTCGCCACCGTTGCCAGACCGGCCTCTTTGACGCTTGACACTGTCCAATTGGATGAT
GAAGGAGTATACCGCTGTCGAGTCGACTTTAAGAATTCTCCCACACGCAATTTCCAAATC
AGGTTGTCCGTTATTGTTCCACCACATCAACTGATACTATACGACAAGTCTGGGCGAGAT
GTTTCGGGCGTGGTGGGTCCGCTCGAAGAGGGCAACGAGCTTGTCCTCGTTTGCGAGGTC
AGAGGAGGTCGTCCAGCGCCAACGGTTATCTGGCTAATCGATAACATACCAGCTCCACAA
TATATAGGAGAGAAGACTGACACACACGTTGTTGTTAACAAGCTAGAATTACCTCATGTA
AAGCGAATCCATCTAAACACCACGTTCAAGTGCAGAGCCTCTAATACCAACCTTGTTAGC
CCACAAGAAAAAACAGTACGTTTAGAAATGAACTTGAAACCAACGCTGGTACAGATACAG
AACAAACCAGTGACGTTATCTTCGGAACGCTACGTCAGCTTATCGTGTGTGTCAGAGGGA
AGCCGCCCGCCCGCGCAGTTGACCTGGTTCAAGGACAATAGAAAATTTAAAAGAGGAAAA
ATAACAGATGCATCTAATGACACTTGGGTGAGCAGCACGCTGCAATTTATGCCACTTCCA
GAAGACGATGGCGTCCAAATAAAATGTCAAGCAGATAACAACGCGCTTCCCGGACAAAGC
ATAGAAGATTCTTTCAAACTGGATGTTGTTTGTAAGTCTTAA
Protein sequence:
MCSMKWLRLLVMLAVCCAQEGEWNEDAEDLVSTVDVDAVLGRTASLPCDVTPDTNEDRVY
MVLWFRAGKSTGGKPIYSIPCVTFRVGSIALQGAEFLQCLELATPGVGLRGPYLMRVKHS
PPPSKFLFPPNQISKEPTTAVFKVRSKNEMLLVLDSFDVRGRSFNKALQWSDPNVFGPRA
YFATVARPASLTLDTVQLDDEGVYRCRVDFKNSPTRNFQIRLSVIVPPHQLILYDKSGRD
VSGVVGPLEEGNELVLVCEVRGGRPAPTVIWLIDNIPAPQYIGEKTDTHVVVNKLELPHV
KRIHLNTTFKCRASNTNLVSPQEKTVRLEMNLKPTLVQIQNKPVTLSSERYVSLSCVSEG
SRPPAQLTWFKDNRKFKRGKITDASNDTWVSSTLQFMPLPEDDGVQIKCQADNNALPGQS
IEDSFKLDVVCKS