| New model in OGS2.0 | DPOGS207752 |
|---|---|
| Genomic Position | scaffold114:+ 6177-17946 |
| See gene structure | |
| CDS Length | 2385 |
| Paired RNAseq reads | 2292 |
| Single RNAseq reads | 5771 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005306 (0.0) |
| Best Drosophila hit | CG17494, isoform C (2e-34) |
| Best Human hit | sarcolemmal membrane-associated protein (7e-45) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC006629 [Tribolium castaneum] (3e-57) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC006629 [Tribolium castaneum] (7e-53) |
| GeneOntology terms | GO:0005887 integral to plasma membrane GO:0005783 endoplasmic reticulum GO:0005856 cytoskeleton GO:0051082 unfolded protein binding GO:0016272 prefoldin complex GO:0005790 smooth endoplasmic reticulum GO:0042383 sarcolemma GO:0005815 microtubule organizing center GO:0005737 cytoplasm GO:0006936 muscle contraction GO:0006457 protein folding |
| InterPro families | IPR000253 Forkhead-associated (FHA) domain IPR008984 SMAD/FHA domain |
| Orthology group | MCL13478 |
Nucleotide sequence:
ATGGTGATAGCAAAGATAAAGAGCGCTAAGGGGGCACAAATGAGTAAAACAATAAAAAAT
ATGGAGTATAACTGGATGAGAGGAGCAATAAATCCAGATCCCCCTAATAATCAAGAAGCG
GGAGTTCCTAAGGCAGTCTTCATACCTCACTCCAATTCTCTGCCATTTGAGGAACGACAT
GTCACATTGGAGCATCCAGTGAAGATCGGCAGAAATGTGTACCGTGCGACACCATCGCCA
ACGAATACCATATTCGAATGCAGGGTCCTCTCCAGGCACCATGCGACGCTGTACTACGAC
AAGGGACATTTTTATCTATTGGACAATGAGAGCAGCAACGGGACGTTCGTGAACAATAAC
CGTTGCACGCTCACTAACACGGAGCCGCACGAGGTGTTCTCTGGGGACGTGGTGCAGTTC
GGGATACCTGTGGTCGAGAACACAGCCAACTCTGAGAAGAACCCGTTCCCACCGGTGATA
GCACTGTTGAAACTGTACCACCCCGACGGTAGTGAAGCCCAGCTGTCCTTCAACCCGTCG
ATGACGACACCGCTCCATCTGAAGGAACTGTACCAGCTGAACAACTTCGTTCAGGAGGCG
ATACAACGCGAAGCTTCCTTAGAGACACGCCTGCGGACGTTAAGGGAATGCGTTGAAAGG
ACGAGATCCGAAGCGGCGGCCTCGTGGGAGCTGTTCGTGGGGGAGCAGCGGCTCCTGATG
AGGGTCCACACCCTGGAAGCAATGCTGGCAGCTGGGAAACATCCTGACGAAGTACAGGTC
GCCCAGCTGCTCAGCGATAAGAGGAACTACCAGGAAGTGGCACAGGAGAGTCTCCGTATG
GCGCACGAACAACGTCTGTCTCTAGAGGAATCGCTGGAGCGTCGCAGTAGGGAGGCGGCG
GCGCTGCATCATCAGAACTACGCCTTACATTTGGCCGCCACCAACGCTATGCAAGAATTG
CAAAAATTGGCTGCGCGCTGTGAGCGTAAGATGTGCGCGGCGAGGCTCGCGGTAACCGCG
GCCGAGGAGAGGGAACAGGCGCTGAGAAAACATCTTCCACTAGCGTATTCGGTACAAAAC
GGCGAGGCGAAAATGTTAGTAGTGAGTACAGACAGCAACAAACTGCAAGAAGCCAAACGA
ACCGGCTCCTTGGAGGAAGCGGTCCGCGCCCTGCCCGACTACATCAAACTGTTGTTGCCA
CAGAATCTGCTTAATAAGGTTGGCATCAAAGCTGTGTCGGCCGAAGGGAAGTCAGCCAAT
GAGTTTGAATTAATATTGAAGAAGAACAACTTGCATAATTCCGAAGGCAGAGAAAAACAA
GAGAAGGAGGAAGGCGGTGTCGGCGGCAGCGGGGAGAAGTCCTCCGAGGCTGATCTGTGT
ACAGACGACGAGAAACATTCGAGACTCAACCACGATGGTGGGAATGAGGAATCTTTGAGT
CCCTTGGACGGTGAACTACGTCCCGATAATAATGCCAATTCGACCTACAACGACGCTGAT
GTCAAAGAAGACTCGCCGAGCAAAGCCGGCGTGGAGTACGCGAACATCCTGCGCGTGATG
GCCGGCCTGAATGAGGAGATAAAAGTGTTGCGGGAGAGGGTGAGCGTCGCCGCGGCAGAG
AACGAGGCTCTCAGGACGGTGAGGGACGAGCTGCTGGCCGCCAGGGACGAGCCGCGAGAA
GAGGACAGCGAACACGACGCGGCCGCCTACAAGGCCAGGATCTCTGAATTACAGGAGCAA
CTGACTCGGTCTACGGCTACAGAGGAGGCGAATCTCGCTAAGATCCAGCGACTGACGACG
AATGCGGCCGAGATGCAAGCCGAACTCGCCTTCAGACCCACCAGAGACGACATCGACGAC
CTCACCACCATGGTCGGGAAGCTGAGGGCGGAGGTGCTGGAGAGAGACGACGTCATCCAG
CGACTGCAGGCGCAGCTCAGGGAGAGGGCGGACACCGTGGACCGCGCCGTGGAGACGTCG
AGGTCATTAGAGAACATCAAAGAAGCCGCCGACGACATCGACACGAAACAGATATCGGCC
GACATAGACGAGATGTTCCGCCTGGACTACGACGACGACGAGAGCGACTCCGCCGCCACC
GAGATCAACAGGGACGAGGAGCTGAGCGCCGGCGAGTACGTGAAGCTGGACGACGACGAG
CGGCTCAGGGTCACCATGAGGAACGGGTCACTGCACGCTTTGGAGGAGGAGCTGGTGCGG
GCCAAGGAGCGCTGGGCGGAGGTCTGCGCCGAGAGGGCGAGGCTGGCGGCCCAGCTCGCC
TCCGCACAGAAGCCACTGAGGTTCGACATCGGCCACGCGCTGGCCCTGGCGCTGCCTCTG
ATGCTGGCCTGCCTGTACTATATGCTGCTGCCTTACCTGTCCTGA
Protein sequence:
MVIAKIKSAKGAQMSKTIKNMEYNWMRGAINPDPPNNQEAGVPKAVFIPHSNSLPFEERH
VTLEHPVKIGRNVYRATPSPTNTIFECRVLSRHHATLYYDKGHFYLLDNESSNGTFVNNN
RCTLTNTEPHEVFSGDVVQFGIPVVENTANSEKNPFPPVIALLKLYHPDGSEAQLSFNPS
MTTPLHLKELYQLNNFVQEAIQREASLETRLRTLRECVERTRSEAAASWELFVGEQRLLM
RVHTLEAMLAAGKHPDEVQVAQLLSDKRNYQEVAQESLRMAHEQRLSLEESLERRSREAA
ALHHQNYALHLAATNAMQELQKLAARCERKMCAARLAVTAAEEREQALRKHLPLAYSVQN
GEAKMLVVSTDSNKLQEAKRTGSLEEAVRALPDYIKLLLPQNLLNKVGIKAVSAEGKSAN
EFELILKKNNLHNSEGREKQEKEEGGVGGSGEKSSEADLCTDDEKHSRLNHDGGNEESLS
PLDGELRPDNNANSTYNDADVKEDSPSKAGVEYANILRVMAGLNEEIKVLRERVSVAAAE
NEALRTVRDELLAARDEPREEDSEHDAAAYKARISELQEQLTRSTATEEANLAKIQRLTT
NAAEMQAELAFRPTRDDIDDLTTMVGKLRAEVLERDDVIQRLQAQLRERADTVDRAVETS
RSLENIKEAADDIDTKQISADIDEMFRLDYDDDESDSAATEINRDEELSAGEYVKLDDDE
RLRVTMRNGSLHALEEELVRAKERWAEVCAERARLAAQLASAQKPLRFDIGHALALALPL
MLACLYYMLLPYLS