New model in OGS2.0 | DPOGS214126  |
---|---|
Genomic Position | scaffold241:- 196802-198698 |
See gene structure | |
CDS Length | 1152 |
Paired RNAseq reads   | 591 |
Single RNAseq reads   | 1534 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA006175 (6e-163) |
Best Drosophila hit   | Autophagy-specific gene 4 (1e-92) |
Best Human hit | cysteine protease ATG4B isoform a (2e-81) |
Best NR hit (blastp)   | PREDICTED: similar to Autophagy-specific protein, putative [Tribolium castaneum] (1e-127) |
Best NR hit (blastx)   | PREDICTED: similar to Autophagy-specific protein, putative [Tribolium castaneum] (1e-124) |
GeneOntology terms   | GO:0004197 cysteine-type endopeptidase activity |
InterPro families   | IPR005078 Peptidase C54 |
Orthology group | MCL14506 |
Nucleotide sequence:
ATGGATGCCATGTTTGATATTTGTTACCTTTCGCCAGACGGTATTAATGTAGAGCCTGAT
GATATTCCGGAAACAAAGGATAACGTATGGGTATTAGGAAAAAAATACAGTGCTATACAA
GATCTGGAGCGTATAAGACGCGATATCACTTCGGTAATATGGTGTACCTACAGAAAGGGC
TTTGTCCCTATAGGAGATGAAGGTTTGACATCGGATAAGGGATGGGGCTGCATGCTCCGT
TGCGGACAAATGGTGCTTGGAGTAGCATTGATTAAAGTTCACTTATCTGCTGATTGGGTG
TGGACTCCCGAAACAAGAGATCCAACATATTTAAAAATAGTCCAAAGATTGGAGGAGAGA
AAACAAGCTCCATACTCAATTCATCAAGTGGCTTTAATGGGGGCATGCGAAGGAAAGGAA
GTAGGCCAGTGGTTTGGCCCAAATACTGTGGCGCAAGTACTCAAAAAATTGGTGGTTTAT
GACAAATGGAGTTCTTTGGTTATTCATGTTGCTTTGGACAATACAGTTGTTAAGGAGGAT
ATTTTGCAACAGTGTATTGTCAATAATGACAGAGGGGATTGCTCTGAGAATGTAGATGGA
TTTGTTGTAAGTGATTGGATGCCTCTTCTGTTAATAGTACCTCTTAGACTTGGGCTTAGT
GAAATTAATCCTATTTATATGGAAGGGCTTAAGATATGTTTTCAATCACCTCAATCTATA
GGTGTAATAGGAGGCAAGCCGAATCAGGCTCTTTATTTAATAGGTTGCGTTGGTGATGAA
GTTATATACTTAGATCCACATACAACACAGAAATCTGGATTAGTGGAGAACAAACTTACA
GATGAACAAAAAGAAATGGACTGTACATATCACTGTAAGTATGCTTCAAGAATTCCAATA
TTGTCTATGGATCCCTCTGTGGCAGTGTGTTTTCTTTGTCGCACAAGAAGTGATTTTGAT
GAACTATGTGAATTAATTGAGAAAAGATTAATGCAAGAGAGTCAACCATTGTTTGAAATA
TGTGAGAAAAGACCATCACATTGGGGCCCCAATACAAACGACATTGATTTACAGAACACT
AATCTATTCACAGAATTTGAAGAAGTTGACAGACAATTTGATGATTCTGACATTGAATTT
GAAATTCTATGA
Protein sequence:
MDAMFDICYLSPDGINVEPDDIPETKDNVWVLGKKYSAIQDLERIRRDITSVIWCTYRKG
FVPIGDEGLTSDKGWGCMLRCGQMVLGVALIKVHLSADWVWTPETRDPTYLKIVQRLEER
KQAPYSIHQVALMGACEGKEVGQWFGPNTVAQVLKKLVVYDKWSSLVIHVALDNTVVKED
ILQQCIVNNDRGDCSENVDGFVVSDWMPLLLIVPLRLGLSEINPIYMEGLKICFQSPQSI
GVIGGKPNQALYLIGCVGDEVIYLDPHTTQKSGLVENKLTDEQKEMDCTYHCKYASRIPI
LSMDPSVAVCFLCRTRSDFDELCELIEKRLMQESQPLFEICEKRPSHWGPNTNDIDLQNT
NLFTEFEEVDRQFDDSDIEFEIL