| New model in OGS2.0 | DPOGS210997 |
|---|---|
| Genomic Position | scaffold307:+ 77324-78537 |
| See gene structure | |
| CDS Length | 1110 |
| Paired RNAseq reads | 164 |
| Single RNAseq reads | 399 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006483 (8e-29) |
| Best Drosophila hit | intermediate neuroblasts defective (2e-16) |
| Best Human hit | homeobox protein Hox-D3 (2e-19) |
| Best NR hit (blastp) | special homeobox protein 8 [Bombyx mori] (7e-28) |
| Best NR hit (blastx) | special homeobox protein 1 [Bombyx mori] (9e-28) |
| GeneOntology terms | GO:0030528 transcription regulator activity GO:0007160 cell-matrix adhesion GO:0051216 cartilage development GO:0010628 positive regulation of gene expression GO:0043565 sequence-specific DNA binding GO:0030878 thyroid gland development GO:0005634 nucleus GO:0048704 embryonic skeletal system morphogenesis GO:0007275 multicellular organismal development GO:0007219 Notch signaling pathway GO:0009952 anterior/posterior pattern formation GO:0045666 positive regulation of neuron differentiation GO:0003700 sequence-specific DNA binding transcription factor activity GO:0006355 regulation of transcription, DNA-dependent |
| InterPro families | IPR017970 Homeobox, conserved site IPR020479 Homeobox, eukaryotic IPR001356 Homeobox IPR012287 Homeodomain-related IPR009057 Homeodomain-like |
| Orthology group | ND |
Nucleotide sequence:
ATGTCAGTCTCAACATCAATTTCGAATGCAGCTCAGCCAGTTTTCAGTCCAACTAATGCC
AGTGATGACCAGTGGCTATCAACCAGCAATCTGCAACCCCGGAACGAGACGAATTTTATA
ACAGGAGAGCCACAGCAATATAAAGTAAATCAAATTAATTATAACAGCACTAGTGCTTTT
TATAATGCACCTGATATTCCGAGTACTCATGTAAATTCTTGCAACGGCCCTATGACTTAT
AATCCAAATTATATAAACACTTGTCCACCAAATCCAGTTTATGGGCAAGAATTTAGATAC
GAACCATCACAAACTGCTCATCCTAATCCAGGAGTTATGTTTTTGGGTCCTCGTGGAACT
ATTGGGACTATGAATTCTTGGAGTAACTCAACCAACAGCAGCAATCGTTTAGTATCTAGG
CCACTGAACGGGAATAAACCGTTAAGTGGTGGTGTAAAGAAACCGAAACGTATTCGCACA
GCATTCACTAGTTCTCAAATGATGGAACTAGAAAACGAGTATACAAGGAACAGATATCTA
GACCGCAGCCGTCGCATCGAACTGTCTGAGATATTGAATTTAAACGAACGCACTATTAAG
ATTTGGTTCCAGAATAGAAGGATGAAGGAAAAGAAGGATAGAGCTGAGAGTCTTGAGGAC
ACTGAAGCCTCAAGCACTACAGAGCTTAACGATCACCAAGATTATCCTGGACAGATGATC
ATGTATGGCCAATATCCCCAAAACTTATACGGCAGAAGTAATATTTACATTGAACAGTAT
CCAGTAACATCCACTCCTCTGACGATGCCGACTAATGAAGTCCAATTAGTTAATAGTATT
CCTGAATCGGTTCTTAATACATATCCCACGTATATGGTTGAGAATAATTCTGATATAGTC
GAGAATTTCGATATTAAAGAACCAGAAATGAACGTGCAAATGCAAGGGTATAATAACAAT
AAAATTGAATTGATCGATTCCAAAGAAACGACCCAAGATTCGGTGCCTCAGTCAGAGAGT
AGTACAAACGACGCTGGTAAAGATGGCTTTAATGGTCCCAATTGGGATTTATCTTGGATC
CGCAGCATTCATATGGACGAAGAACTTTGA
Protein sequence:
MSVSTSISNAAQPVFSPTNASDDQWLSTSNLQPRNETNFITGEPQQYKVNQINYNSTSAF
YNAPDIPSTHVNSCNGPMTYNPNYINTCPPNPVYGQEFRYEPSQTAHPNPGVMFLGPRGT
IGTMNSWSNSTNSSNRLVSRPLNGNKPLSGGVKKPKRIRTAFTSSQMMELENEYTRNRYL
DRSRRIELSEILNLNERTIKIWFQNRRMKEKKDRAESLEDTEASSTTELNDHQDYPGQMI
MYGQYPQNLYGRSNIYIEQYPVTSTPLTMPTNEVQLVNSIPESVLNTYPTYMVENNSDIV
ENFDIKEPEMNVQMQGYNNNKIELIDSKETTQDSVPQSESSTNDAGKDGFNGPNWDLSWI
RSIHMDEEL