New model in OGS2.0 | DPOGS210999  |
---|---|
Genomic Position | scaffold307:+ 84698-85913 |
See gene structure | |
CDS Length | 891 |
Paired RNAseq reads   | 17 |
Single RNAseq reads   | 47 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA003811 (9e-09) |
Best Drosophila hit   | CG18599 (9e-09) |
Best Human hit | homeobox protein VENTX (2e-07) |
Best NR hit (blastp)   | GL21794 [Drosophila persimilis] (1e-09) |
Best NR hit (blastx)   | zerknuellt protein [Megaselia abdita] (6e-09) |
GeneOntology terms    | GO:0003700 sequence-specific DNA binding transcription factor activity GO:0005634 nucleus GO:0043565 sequence-specific DNA binding GO:0006355 regulation of transcription, DNA-dependent |
InterPro families    | IPR001356 Homeobox IPR012287 Homeodomain-related IPR009057 Homeodomain-like |
Orthology group | ND |
Nucleotide sequence:
ATGGCAGTTTTTAACAGTTTTACAGACTCATGTGAGAATATTGCAACGAGTAGTATTTTA
GAATATTACAATACCGTTGGGGAATATGTTAAATCTACAATACCACAGTTTGGCAGCAAC
AATCATACTTCTCAGAAACCATTGGTTGTGATTAAGGATAATAATGTTAATTTGTGGCCG
AAGCAGATGATCGCTAATAGTTCGACATCTCAATATGCTTGCACGTTTAAGGATAAGAAG
ATGAAATATGTTCATAACCACATTCCAAATAAGAATTTTCAGAATACAAATAATATGCTA
CTTAATATATCGTATGTCCAACCAACTATCTGCAAAGTTGAGACGAGGAAACAACTCTAC
TATAATTCAAACAAACATAACTCATTGAAAGTTAATATGAAAAAGAAGAGAAAGCGAACT
ATATTCACAACAGAACAAATTATTGCTTTGGAAGCAATATTTCAGAAGAAGCCTTATATA
AATCGAGACGAAAGATTAATGTTAATGAAAAAATTGCAAGTCAGTGAAAAATCCATAAAG
GTTTGGTTCCAAAATCGTCGCCGTTTGACTGATAAGAAAGACAAAGATTACGAATCTGAT
TCCCCGTCATCAGAAGATTCCTCTGAGATGACGGGTGATAGACTTACATATATCGAATCA
CAAATCAATAAGAATACGGATGAGCATGGATACGTCACCTTAAATGACAGAGTGATGAGT
GATTTAGTTCATGTTATAAATGATTATTTGTCTAAAGACGTATCATGGAGCCAACCCTTA
TGTGATGATAATAAAACAACAGTTCTGAATGACGGAGTCCATGGCGACATAGTTATGTAC
GAACCGATATCACCAGTGAGCTTAACAGATATTTTGGATGACTTCATTTAA
Protein sequence:
MAVFNSFTDSCENIATSSILEYYNTVGEYVKSTIPQFGSNNHTSQKPLVVIKDNNVNLWP
KQMIANSSTSQYACTFKDKKMKYVHNHIPNKNFQNTNNMLLNISYVQPTICKVETRKQLY
YNSNKHNSLKVNMKKKRKRTIFTTEQIIALEAIFQKKPYINRDERLMLMKKLQVSEKSIK
VWFQNRRRLTDKKDKDYESDSPSSEDSSEMTGDRLTYIESQINKNTDEHGYVTLNDRVMS
DLVHVINDYLSKDVSWSQPLCDDNKTTVLNDGVHGDIVMYEPISPVSLTDILDDFI