New model in OGS2.0 | DPOGS200711  |
---|---|
Genomic Position | scaffold111:- 3227-56364 |
See gene structure | |
CDS Length | 2373 |
Paired RNAseq reads   | 382 |
Single RNAseq reads   | 941 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA004752 (8e-105) |
Best Drosophila hit   | CG34114, isoform B (1e-124) |
Best Human hit | immunoglobulin superfamily member 10 isoform 2 (2e-14) |
Best NR hit (blastp)   | PREDICTED: similar to CG34114 CG34114-PB [Tribolium castaneum] (5e-152) |
Best NR hit (blastx)   | PREDICTED: similar to CG12950-PA [Apis mellifera] (1e-146) |
GeneOntology terms    | GO:0003674 molecular_function GO:0005575 cellular_component GO:0008150 biological_process |
InterPro families    | IPR013098 Immunoglobulin I-set IPR013162 CD80-like, immunoglobulin C2-set IPR013106 Immunoglobulin V-set IPR007110 Immunoglobulin-like IPR003961 Fibronectin, type III IPR003599 Immunoglobulin subtype IPR003598 Immunoglobulin subtype 2 IPR013783 Immunoglobulin-like fold IPR008957 Fibronectin type III domain |
Orthology group | MCL15932 |
Nucleotide sequence:
ATGACTTGCTCGCAAAAGGAGGCCATAGCGACACAAATGGTCTCGCCTTCCAGTATCTTT
GGCAGTCCATTGTCTTCTGTCACTGGGACGGTCACAAGGGTGTCATCGGTAGTGGGAGGA
GAGGCAAGCCTACCATGCGATTCGCGCCCTCCTCAACGTAATGATAGCCTGCTCCTTGTG
GTGTGGTATAGGGACGACAACCCTGTATACAGCTATGACACGAGAGTCTCAGGGTCAACG
GGTCACTGGTCAGATGACACATTTGGAGATCGAGCAAGATGGGTCGGCTTCCCAAGCTCC
GGTCTTCATGTCCGGGATGTCCGGTCTCACGATAGATCCATATACAGATGTCGGGTCGAC
TTCCAAGTGTCACCGACAAGAAATTATAGAATTGCTCTCGATGTTATCGAGCTACCCTCG
AAACCGGTGATCTTTGACGAGTTCGGCAAAGAAATAACCGGAACTGCCGGCCCTTTCAAC
GAAGGGGGCGACTTTAAGCTTATTTGCTCCGTGAATGGGGGCAATCCTACGCCAAGAGTA
CAATGGTTGCATGGCGAAACTGTACTCTCTTCACTGAGCGCGGTAGAGATGCCAGTGGGT
AACACCAGGTCATTGACCCTCTTGGTCACAAACGCAACTCGTGCACACTTGTCGTCTGTA
TACACATGTACAGCGGATAATACACTGCTATCTCCGCCACAAAGGGCCTCCGTTCGTGTA
GATCTGTATTTGCGGCCACTGTCAGTCGAAATCTTATCGAGGGAGCAACCATTATCAGTG
GGCAGACAAGCCGAGCTTTGGTGCAAGTCAACAGGTGCAAGACCTCCAGCAGTTGTCACT
TGGTGGCTAGGTGGCAAAAAACTTGAATCTATAACTAAACAACAGGATTTAGAAGAAAAG
AACGAGACTCAGTCTCTGTTGAAATGGACACCTTCAAAGGAACAAAACGGAAAAATACTC
ACGTGTAGAGCAGAACATTCCAAGTTCAATAGTTCAACGATTGAGAGTAAATTGCTACTT
AACATTTATTATGTGCCGGTTGCTACAATGCACCTTGGCGCGAAAATGAACCCGAACGAT
ATTGAAGAAGGAGACGATGTGTACTTCGGATGCGAAGTTGATGCCAATCCCCCTGCTTAT
AAAGTTGTGTGGGAACATAACGGTATTTTGCTTCAACACAATCCTGCTAACGGAGTCATC
CTAACTGGTAACACGAACCTTGCAATACGTAATGTGTCACGACACCAGGCCGGTAACTAT
ACCTGCACTGCGTCGAACGTCGAAGGAGACGGAAAGTCACTTCCCGTGCGAATGCAAGTC
GTTTATAGACCCATATGTCGATCGAAAGATATGAAAATAATAGGTGCAGCCTTACAAGAA
CCATCGAAGGTAGAATGCGAGGTGGATGCTTTCCCTCCCCCAGACACGTTTGAGTGGACA
CTTAATAATTCTGCCGGCTCAATAAAGGTTGACCCTGAACGCTTCAACGTCAATGGTCAA
GCCGGAAAATCGGTATTAACGTATGTCCCCGTATCCGACACGGATTACGGAAAGTTGTCG
TGTCGTGCAACAAACCTAGCAGGGCAACAAATGTTGCCATGCGTGTACACTATACTGCCT
GCAACTAGACCTGACCCACCGTCCAACTGCTCAGTATATAATCTAACCGATGATTCGCTG
GATTTAACTTGCCTTGCGGGTTACGAAGGTGGCCTTCAATGTATCTACGTAGCAGAAGTC
TGGGCTAATGAAGGTTTAGTAACAAATTCAACAAATGGTGCTACTGTTTGGAATCTTAGA
AGACTTGGCGCTAAAAGACAATTAAACATTGTGGTATATGCCGCAAATATAAGAGGGAGG
TCTGAACATGTCACATTAACAGTAGAAACTGCCCCGCAATTATCTCCTAGAACAGAAGCG
CAAGAGGCATGGGAAGTCAACTGGGCTGTCGGTGGTGTGCTTGGCGCTGCACTCACTGTA
GCATTCATACTATGTCTTGCACTTATCGCTTCAAGATTACGACACAGTGCCAGAGATTAT
GGAGTGACAGTACAAGCAACGAAGAATCCTAAGGTGACTCTGCAGAAGAGGTGCTCGCCG
GACGATCGTAATCCGGATCTCATTCCGCTCAGTAAAAGTGTCACAGATGGCCCTCCTGAA
CCACCGCAATATTCAGCCGTCGTACCTAAAACGGAAACGAAAAATTCTACCAGCTCTCAC
AGCTTGGCACACACCCAATCCCCAAGCTCGCCAACTAATACTCAACATGATTTATCGAAC
GAACGGCCAGTTAACGGTAACGCGAGGTCACACCGAGAGGTTGTGACCACTCGTACCCCA
TTGCTGGCAGCGCATCAAGAAAGCTGTGTGTAG
Protein sequence:
MTCSQKEAIATQMVSPSSIFGSPLSSVTGTVTRVSSVVGGEASLPCDSRPPQRNDSLLLV
VWYRDDNPVYSYDTRVSGSTGHWSDDTFGDRARWVGFPSSGLHVRDVRSHDRSIYRCRVD
FQVSPTRNYRIALDVIELPSKPVIFDEFGKEITGTAGPFNEGGDFKLICSVNGGNPTPRV
QWLHGETVLSSLSAVEMPVGNTRSLTLLVTNATRAHLSSVYTCTADNTLLSPPQRASVRV
DLYLRPLSVEILSREQPLSVGRQAELWCKSTGARPPAVVTWWLGGKKLESITKQQDLEEK
NETQSLLKWTPSKEQNGKILTCRAEHSKFNSSTIESKLLLNIYYVPVATMHLGAKMNPND
IEEGDDVYFGCEVDANPPAYKVVWEHNGILLQHNPANGVILTGNTNLAIRNVSRHQAGNY
TCTASNVEGDGKSLPVRMQVVYRPICRSKDMKIIGAALQEPSKVECEVDAFPPPDTFEWT
LNNSAGSIKVDPERFNVNGQAGKSVLTYVPVSDTDYGKLSCRATNLAGQQMLPCVYTILP
ATRPDPPSNCSVYNLTDDSLDLTCLAGYEGGLQCIYVAEVWANEGLVTNSTNGATVWNLR
RLGAKRQLNIVVYAANIRGRSEHVTLTVETAPQLSPRTEAQEAWEVNWAVGGVLGAALTV
AFILCLALIASRLRHSARDYGVTVQATKNPKVTLQKRCSPDDRNPDLIPLSKSVTDGPPE
PPQYSAVVPKTETKNSTSSHSLAHTQSPSSPTNTQHDLSNERPVNGNARSHREVVTTRTP
LLAAHQESCV