| New model in OGS2.0 | DPOGS214847 |
|---|---|
| Genomic Position | scaffold780:+ 10665-34551 |
| See gene structure | |
| CDS Length | 4143 |
| Paired RNAseq reads | 7922 |
| Single RNAseq reads | 36177 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010015 (7e-16) |
| Best Drosophila hit | ensconsin, isoform E (3e-21) |
| Best Human hit | nebulin isoform 1 (2e-16) |
| Best NR hit (blastp) | paternally expressed 3 [Bos taurus] (3e-76) |
| Best NR hit (blastx) | paternally expressed 3 [Bos taurus] (6e-72) |
| GeneOntology terms | GO:0008270 zinc ion binding GO:0005737 cytoplasm GO:0046872 metal ion binding GO:0003700 sequence-specific DNA binding transcription factor activity GO:0003676 nucleic acid binding GO:0005622 intracellular GO:0006915 apoptosis GO:0005634 nucleus GO:0006355 regulation of transcription, DNA-dependent |
| InterPro families | ND |
| Orthology group | MCL22720 |
Nucleotide sequence:
ATGGTATCAGGGTCTATTACTGTCACCCCAAAGACCCCTTTATTGCCAGGTCTAATGCGC
ATGCGTATAAGTGTACACGAATTAAAAAATATAAATGAAGAAGTGGTTCATAGAAGTAGA
GATAAATTAAAAATTGAAAATTATTTGCCCGTTATAGACATGCTCTATACAGAATTGTCG
CGACGAATAGAGCAATATAGTGAAATTGATTATCTGTTTGGATTCCTAACAGATTTCTTG
AAAAAGCCCGATGAGGATATTAGAAGCGAATGCTCCAAGATGAAGGAGAACTATTGCAAT
TATGTTGAACCCGAATTCATACACGAGATTCTTCTTCATCGTCGCAAGAGTCTTTGCAGA
CTCGTCGAGGTCATCACGTATCAACGCCATCTTCAGTTTTATGAATATTCACCAATCATC
TATCGCTGTTGGAACTTCGCTGGCAGTGAACGGAACGAACTGTCGCTGTATAGATCGCTT
GGAGCGCTCGCTGGCCGTCTGGCTGGAAATAGTGAACGAAAGGCCTTAGATCGTGCGAGG
TTGGCCCGTGAGCGGCGAGAGGCCGAACAACGGAAACGCCTCGACGAGCTGAGAGCTCAT
GCTGCGGCAGCCCAGGCTCAGAGGGAGAAGAGGGATGAGGATCGGAGGCGGAGGATGGCC
GAGGCTCGCTCCAAGGACGAGGATAGGAGGACCCAGGACGAAAATAACGAGGCGACTTCC
TTCGAGGACGGCGGCTGGTCACCCTGGAGTGGTGACTGTGAACGAATGAAAGTTGGTGTT
AAACAGGTTGAGGAGCGTAAGCGCGCTATATGGGAGGCGTCTGTGTCCAGGCGTGAGGCT
CTCCTCCAGCGAGAGCGTGATCGTTCTGAGCGCTTGGAGCGTGCCCGGGCCGCACGCTCG
TCTCCGCGGCCGGCCTTCGCCTTCGGGTCCTCCACACCCAGGCTCCTAGAGCCTGTCGAC
TCTGCCGGCTTCTTCTGGGCAGCGCGCAGTACCAACCCCATAGATCAGATGAACTTTTTT
GAATCTCTGGCGGCATCAACGAACAATGTGATGTTTGCATCTGCGCCGCTAACACGTCGT
GCGTCCGCTCTTCAGCTTGACACATCCGATACTGACAATAAAGACGAGCCGGTGTCCCCT
CAGCCGCTGTGGTCGTCCGTGGCCCGTCGAAGGACCGACCTGGTGCCCACCCTCCCCGCC
CGTCCAGAGACCCGGTCCGGGGAGGCGACCCCGTCCCGTCCCGGCAGCTCGCTGTCGTCG
GCGGCCCCGGTGCTTCGGCGCGCGTCCTCGGCGCCCCGCAAGCCGCGCCCCGCCTCCATA
GCCGGTACGGGTGTTAACACGCCCCGAGGTGCGGACACGGGTGCCAACAGTGCGTCCACG
ACCCCGTCCGTGTCCCGGGACGCCACCGTGGTGTCCCGCCCCGCCGCGCCCCGCAGACCG
CGGCCGCTCTCGCTACACGCGCCCGCCAAGAACGTTCCATCCACCCCGACGGCTCCGGGT
GAGGGCAAGCCGCCGCTACATAGGAAGCCAAAGCCATCCAAAGAACATGACAAGAATCGC
AAGTCTATGTCTATATCTCCGGGGCGAGGCTTGTCTCCGTCCAAGGATTCCGCGGACAAA
GATCTTATGACCAAGAGCGTGGGCGGAGATAAGAGTGTGGTCAACGCGTTCGAGGTGACA
CAGAAGTTGGAAGCGCTGAGGATTGATTCACAGCAAGCAAGCGAAAACAAAAGCGTAGAA
AATAAGCATGTAACGAATAACGAACAAATCATTGAACAGAAAGAGAAGATGGACGTACAG
AAGCCAGAGAAGATGACAGAAGATAAAGAGGAGAAGAAGGAAAAGAGGGAGGAGAGAGAG
GAGAAGAAAGATAAGAAGGAGCCGTCACAGGAAAAGACCGAGGACAATGAAATGACTGGT
GTGACGCAGGAGAATGTTAACACAAGTGTGACGCAGGAGAATGTTAACACTGGTGTGACA
CAGGAGGATGTCAACAAAAGTTTAACACTGGAGAATGTTAACAAAAGTTTAACACAGGAG
AATGTTAATACAGGTGTGACGCAGGAGAATGTTAACACAAGTGTGACGCAGGAGAATGTT
AACACTGGTGTGACACAGGAGGATGTCAACAAAAGTTTAACACTGGAGAATGTTAACAAA
AGTTTAACACAGGAGAATGTTAATACAGGTGTGACGCAGGAGAATGTTAACACAAGTGTG
ACGCAGGAGAATGTTAACACTGGTGTGACACAGGAGGATGTCAACAAAAGTTTAACACTG
GAGAATGTTAACAAAAGTTTAACACAGGAGAATGTTAATACAGGTGTGACGCAGGAGAAT
GTTAACACAAGTGTGACGCAGGAGAATGTTAACACTGGTGTGACACAGGAGGATGTCAAC
AAAAGTTTAACACTGGAGAATGTTAACAAAAGTTTAACACAGGAGAATGTTAATACAGGT
GTGACGCAGGAGAATGTTAACACAAGTGTGACGCAGGAGAATGTTAACACTGGTGTGACA
CAGGAGGATGTCAACAAAAGTTTAACACTGGAGAATGTTAACAAAAGTTTAACACAGGAG
AATGTTAATACAGGTGTGACGCAGGAGAATGTTAACACAAGTGTGACGCAGGAGAATGTT
AACACTGGTGTGACACAGGAGGATGTCAACAAAAGTTTAACACTGGAGAATGTTAACAAA
AGTTTAACACAGGAGAATGTTAATACAGGTGTGACGCAGGAGAATGTTAACACAAGTGTG
ACGCAGGAGAATGTTAACACTGGTGTGACACAGGAGGATGTCAACAAAAGTTTAACACTG
GAGAATGTTAACAAAAGTTTAACACAGGAGAATGTTAATACAGGTGTGACGCAGGAGAAT
GTTAACACAAGTGTGACGCAGGAGAATGTTAACACTGGTGTGACACAGGAGGATGTCAAC
AAAAGTTTAACACTGGAGAATGTTAACAAAAGTTTAACACAGGAGAATGTTAATACAGGT
GTGACGCAGGAGAATGTTAACACAAGTGTGACGCAGGAGAATGTTAACACTGGTGTGACA
CAGGAGGATGTCAACAAAAGTTTAACACTGGAGAATGTTAACAAAAGTTTAACACAGGAG
AATGTTAATACAGGTGTGACGCAGGAGAATGTTAACACAAGTGTGACGCAGGAGAATGTT
AACACTGGTGTGACACAGGAGGATGTCAACAAAAGTTTAACACTGGAGAATGTTAACAAA
AGTTTAACACAGGAGAATGTTAATACAGGTGTGACGCAGGAGAATGTTAACACAAGTGTG
ACGCAGGAGAATGTTAACACTGGTGTGACACAGGAGGATGTCAACAAAAGTTTAACACTG
GAGAATGTTAACAAAAGTTTAACACAGGAGAATGTTAATACAGGTGTGACGCAGGAGAAT
GTTAACACAAGTGTGACGCAGGAGAATGTTAACACTGGTGTGACACAGGAGGATGTCAAC
AAAAGTTTAACACTGGAGAATGTTAACAAAAGTTTAACACAGGAGAATGTTAATACAGGT
GTGACGCAGGAGAATGTTAACACAAGTGTAATACAAGAGAATGTTAACACAAGTATAACA
CAGGAGAGCGTTAACAAAAGTGTGACGCAAGAAAGTGTAACAAGTGTGAAAGGAAGTCAA
GACATGATAGTCGATACCACGCCAGCGATACCAAATGAAAGTGTAACGAGTGCAATTATA
CCAAATAAAGACGGAAGTGAAAAATCGAGGGATGACGCAGGGAGTGGTAGAAAAAGTAAC
ACGACAAGCGAAGGAAGTGTCGGAAATGTTGCCAACACTGATAGCAGTAACGGAAACGTG
CAGGGGGGGGAGGCACAGAGTCTAGGTAGTCATAGCGTGTGTCCGTCCGGTGCTCCGACT
AACAACGGGAATGTGGCTGATCTACTCGGCTTGTCCACGCAAATGGAAACGGTGGACAAA
CCGGAGGAGCAAACGCCGGCGAAGACAATCGACAACACGCCGACACTGGACACCAACAAC
GGGAACACGAACGTCGGCCACGTGTCGGCCAACTTCATACAGTCGGAGCGGATGGCCGAC
GACTTCACCACGCACAACGGCCACGGTCACAACCATCCGCTCACACTGCAAAATGCGATC
TAA
Protein sequence:
MVSGSITVTPKTPLLPGLMRMRISVHELKNINEEVVHRSRDKLKIENYLPVIDMLYTELS
RRIEQYSEIDYLFGFLTDFLKKPDEDIRSECSKMKENYCNYVEPEFIHEILLHRRKSLCR
LVEVITYQRHLQFYEYSPIIYRCWNFAGSERNELSLYRSLGALAGRLAGNSERKALDRAR
LARERREAEQRKRLDELRAHAAAAQAQREKRDEDRRRRMAEARSKDEDRRTQDENNEATS
FEDGGWSPWSGDCERMKVGVKQVEERKRAIWEASVSRREALLQRERDRSERLERARAARS
SPRPAFAFGSSTPRLLEPVDSAGFFWAARSTNPIDQMNFFESLAASTNNVMFASAPLTRR
ASALQLDTSDTDNKDEPVSPQPLWSSVARRRTDLVPTLPARPETRSGEATPSRPGSSLSS
AAPVLRRASSAPRKPRPASIAGTGVNTPRGADTGANSASTTPSVSRDATVVSRPAAPRRP
RPLSLHAPAKNVPSTPTAPGEGKPPLHRKPKPSKEHDKNRKSMSISPGRGLSPSKDSADK
DLMTKSVGGDKSVVNAFEVTQKLEALRIDSQQASENKSVENKHVTNNEQIIEQKEKMDVQ
KPEKMTEDKEEKKEKREEREEKKDKKEPSQEKTEDNEMTGVTQENVNTSVTQENVNTGVT
QEDVNKSLTLENVNKSLTQENVNTGVTQENVNTSVTQENVNTGVTQEDVNKSLTLENVNK
SLTQENVNTGVTQENVNTSVTQENVNTGVTQEDVNKSLTLENVNKSLTQENVNTGVTQEN
VNTSVTQENVNTGVTQEDVNKSLTLENVNKSLTQENVNTGVTQENVNTSVTQENVNTGVT
QEDVNKSLTLENVNKSLTQENVNTGVTQENVNTSVTQENVNTGVTQEDVNKSLTLENVNK
SLTQENVNTGVTQENVNTSVTQENVNTGVTQEDVNKSLTLENVNKSLTQENVNTGVTQEN
VNTSVTQENVNTGVTQEDVNKSLTLENVNKSLTQENVNTGVTQENVNTSVTQENVNTGVT
QEDVNKSLTLENVNKSLTQENVNTGVTQENVNTSVTQENVNTGVTQEDVNKSLTLENVNK
SLTQENVNTGVTQENVNTSVTQENVNTGVTQEDVNKSLTLENVNKSLTQENVNTGVTQEN
VNTSVTQENVNTGVTQEDVNKSLTLENVNKSLTQENVNTGVTQENVNTSVIQENVNTSIT
QESVNKSVTQESVTSVKGSQDMIVDTTPAIPNESVTSAIIPNKDGSEKSRDDAGSGRKSN
TTSEGSVGNVANTDSSNGNVQGGEAQSLGSHSVCPSGAPTNNGNVADLLGLSTQMETVDK
PEEQTPAKTIDNTPTLDTNNGNTNVGHVSANFIQSERMADDFTTHNGHGHNHPLTLQNAI