| New model in OGS2.0 | DPOGS200308 |
|---|---|
| Genomic Position | scaffold629:- 34308-42064 |
| See gene structure | |
| CDS Length | 1443 |
| Paired RNAseq reads | 1000 |
| Single RNAseq reads | 2302 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005584 (0.0) |
| Best Drosophila hit | sans, isoform B (3e-97) |
| Best Human hit | ankyrin repeat and SAM domain-containing protein 4B (2e-48) |
| Best NR hit (blastp) | PREDICTED: similar to CG13320-PA, isoform A [Apis mellifera] (8e-116) |
| Best NR hit (blastx) | AGAP007027-PA [Anopheles gambiae str. PEST] (1e-102) |
| GeneOntology terms | GO:0008150 biological_process GO:0005737 cytoplasm GO:0005515 protein binding GO:0005769 early endosome |
| InterPro families | IPR002110 Ankyrin repeat IPR021129 Sterile alpha motif, type 1 IPR001660 Sterile alpha motif domain IPR020683 Ankyrin repeat-containing domain IPR013761 Sterile alpha motif-type IPR010993 Sterile alpha motif homology |
| Orthology group | MCL15603 |
Nucleotide sequence:
ATGACAACAGATAGGTTCCATAAAGCAGCTAAAGATGGTCTCCTGGAAGTGCTTAGGGAA
GCGACGAGGAAGGAGTGCAACAACAAGGATGAATCAGGCATGACTCCGACCTTGTGGGCT
GCCTTTGAAGGTCACATAGAGGCACTGCGACTACTCTGTGGCAGAGGGGGTGAACCTGAT
AAATATGATTACTTCGGCAACACAGCCCTCCACCTAGCAGCTGCACGCGGTCATAAGGAA
TGCGTGACGTTTTTGGTAAACTTCGGTGCCAACCTGTACGCCATGGACGTAGACGGTCAC
ACGGCCCAGGAGCTGGCCGCCATCAACGGAAGAGATGATATACTGCGTTTCCTCGACCAA
ACTATCGGCAAACTGGAAAATAACGACAAAAAAAAAGCGAAGTCCCTCAAAGAAAAGGCA
AAGAAGGATCACGAGAAACTTCAAAAGCAGTACACTAAGAGGCAGAGTAAGGCGGAGGTG
ATGGCGGACAAAGAATTAAAGAAACTAGCCAAGGAATGGGACCACGGATACAACGAAGAA
ATAACGACCATGCCGCATAGACCAAGCAACGTGTTGCTGGCTCTGAAACAGAAAATGACA
CGCTCCTCGAGTCAAGGTAATCTTCTGGACGATCCTCGTCCGACGTACAGCGCGCTAGTG
GGCACGGTGTCGTCAGGGGCTCGAGGCCGAGGCGCCGTCTACAAGAAAGCTCTCGCCAGC
AAACTCAAGAACGGCACCCTTGGGAAAACCAGCGTTAGAGACGACTTCAAGGTAGGCGAG
GTAGAGACGACAGGTCGTCGCTCGGTGACGTCATTGAGCGGAGTGCGTCGCGACTCAGAG
GTCATGTACGTCGGCACCTTCGGAGCCGGTCCTCAACAAAGGGCGCCCGTCGCTGATGTC
TTCACTGACAAACCATTACTCACCAGATCAGCGAGTCAACCCGACTTCTTGGCGGCGCAA
CAGGGGGAAGACAGCGGCATCGGACAGGAAGTGCTGCTGCAGGAACCGGCCAGTATATTT
GACAGACCCGGGTTTGGTAGTGTTGCGTTTAGACGTTCCATAACAGCCACACTGAGCGCG
ATGCCGGCCAGCGAGGAGTTGTCCATAGGATCCGCGGGCTCCCTTGCAAGACACGCTTAC
CAACCAGCTGAGTGGGCCTCTACACAGTCAGGGAGTTCCACTATAACATCCGACGAGGAA
CCCGAGGCGGATGACACGGGATACTCGTCACTCGAACGCTTCTTGACGGCGTGGGGTCTG
TCACAGTACATCCAGAAGTTCAAGGACGAGCAGATCGACCTTGACGCGCTGATGCTTCTC
ACCGAGAGCGACATGAAGAGCCTCGGGCTGCCGCTGGGACCGTACCGAAAGTTGGTCACA
GCTGTTCAGGAGAGGAAGCAGGCTCTATCCCAACCGGGCCCCATGATAGATACCGCTATA
TAG
Protein sequence:
MTTDRFHKAAKDGLLEVLREATRKECNNKDESGMTPTLWAAFEGHIEALRLLCGRGGEPD
KYDYFGNTALHLAAARGHKECVTFLVNFGANLYAMDVDGHTAQELAAINGRDDILRFLDQ
TIGKLENNDKKKAKSLKEKAKKDHEKLQKQYTKRQSKAEVMADKELKKLAKEWDHGYNEE
ITTMPHRPSNVLLALKQKMTRSSSQGNLLDDPRPTYSALVGTVSSGARGRGAVYKKALAS
KLKNGTLGKTSVRDDFKVGEVETTGRRSVTSLSGVRRDSEVMYVGTFGAGPQQRAPVADV
FTDKPLLTRSASQPDFLAAQQGEDSGIGQEVLLQEPASIFDRPGFGSVAFRRSITATLSA
MPASEELSIGSAGSLARHAYQPAEWASTQSGSSTITSDEEPEADDTGYSSLERFLTAWGL
SQYIQKFKDEQIDLDALMLLTESDMKSLGLPLGPYRKLVTAVQERKQALSQPGPMIDTAI