| New model in OGS2.0 | DPOGS200318 |
|---|---|
| Genomic Position | scaffold629:+ 798-4910 |
| See gene structure | |
| CDS Length | 1305 |
| Paired RNAseq reads | 330 |
| Single RNAseq reads | 802 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005614 (0.0) |
| Best Drosophila hit | CG5337 (0.0) |
| Best Human hit | TBC1 domain family member 16 (5e-127) |
| Best NR hit (blastp) | hypothetical protein AaeL_AAEL002711 [Aedes aegypti] (0.0) |
| Best NR hit (blastx) | hypothetical protein AaeL_AAEL002711 [Aedes aegypti] (0.0) |
| GeneOntology terms | GO:0005096 GTPase activator activity GO:0032313 regulation of Rab GTPase activity GO:0005097 Rab GTPase activator activity GO:0005622 intracellular |
| InterPro families | IPR000195 Rab-GAP/TBC domain |
| Orthology group | MCL16277 |
Nucleotide sequence:
ATGCGTTCGTTGCGTTTGTTCTTTAACGACGACAACTACACCTGCGGACAGCTGGTGGTT
GCATCTCGGGAGTCCCAGTATAAGATACTCCACTTCCACCACGGCGGGTTGGATCATCTG
GCTCAAGTGCTGCATCGATGGCATACACTGCTGCACAATATTAAATTAACTCCAGGATCT
GAAGATCCTGAGACGCCGTTACGTCATTTCATGGTTTGTCGACCAGAAGTGCAGAAGTTC
GAACAGCATCCCGAAGAAGACAAGGTCCCTAAAATAACACCTGAACTGTTCTATGGGAAG
ATAATGAACGACAAGGGCATCATAGAGGATGATTTGTTCTTACGGAAATGTGTTTTCTTT
GGAGGTCTCGATAAAGAGTTGAGGAGGGAGGTGTGGCGTTTCCTGCTGCACTGCTATCCG
TATAACTCAACATTCGAGGAAAGGGATATGATACTACAGATAAGAACTAGAGAGTACCAC
GAGATCACGAGGAGGCGCCTGGAGAAGATGACGCCGGAACAGCACGCGGTGTTTTGGAAG
ACGGTGCAGAGTGTCATAGAGAAGGACGTCGTCAGAACCGACAGAGGGAACCCGTTCTTT
GCTGGTGAAAATAACTATAACATTGAAATTATGAAGAACATCTTACTCAACTACGCCGTG
TACAACCCGGCGCTGGGATACTCTCAAGGCATGAGCGATCTGTTGGCGCCTGTTTTGTGC
GAGATCAAATGTGAATCTGAGGCGTTCTGGTGCTTCGTGGGTCTGATGCAGCGAGCGATC
TTCGTGTGTACACCCACAGACAATGATATGGACAATAACTTGAGCTATCTTCGGGAGCTA
ATACGGATAATGTTGCCACACTTTTACAAACACCTCGAGAAACACGTGGACGCTATGGAA
TTGCTATTCTGTCACCGATGGATTTTACTGTGCTTCAAGCGTGAGTTTACTGAGGCGGTT
GCCCTTCGCATGTGGGAGGCGTGCTGGTCCAACTATCAGACCGACTATTTCCACTTGTTC
CTCTGTCTCGCCATACTAGCGGTGTACGCGGATGACGTCATCGCTCAGGACCTCAACACA
GACGAGATGCTGTTACACTTCAGCTCACTGGCGATGTACATGAACGGTCGCGACATCCTC
CGCAAGGCCCGCGGTCTCCTCCATCAGTTCCGCCAGCTGGTCCGCATACCCTGCACTCTG
GCCGGTATGTGCCAGCGCTGCGGCCCCGGGATATGGGACTCCACACACCGCCCCAGCATC
GAATGCACCGGCGCGCACGACCTTTGCCAATACGTAGTGCAGTGA
Protein sequence:
MRSLRLFFNDDNYTCGQLVVASRESQYKILHFHHGGLDHLAQVLHRWHTLLHNIKLTPGS
EDPETPLRHFMVCRPEVQKFEQHPEEDKVPKITPELFYGKIMNDKGIIEDDLFLRKCVFF
GGLDKELRREVWRFLLHCYPYNSTFEERDMILQIRTREYHEITRRRLEKMTPEQHAVFWK
TVQSVIEKDVVRTDRGNPFFAGENNYNIEIMKNILLNYAVYNPALGYSQGMSDLLAPVLC
EIKCESEAFWCFVGLMQRAIFVCTPTDNDMDNNLSYLRELIRIMLPHFYKHLEKHVDAME
LLFCHRWILLCFKREFTEAVALRMWEACWSNYQTDYFHLFLCLAILAVYADDVIAQDLNT
DEMLLHFSSLAMYMNGRDILRKARGLLHQFRQLVRIPCTLAGMCQRCGPGIWDSTHRPSI
ECTGAHDLCQYVVQ