| New model in OGS2.0 | DPOGS200324 |
|---|---|
| Genomic Position | scaffold629:+ 72017-91046 |
| See gene structure | |
| CDS Length | 1053 |
| Paired RNAseq reads | 88 |
| Single RNAseq reads | 214 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005619 (6e-78) |
| Best Drosophila hit | unc-4 (8e-52) |
| Best Human hit | homeobox protein unc-4 homolog (2e-34) |
| Best NR hit (blastp) | unc-4 [Drosophila melanogaster] (2e-75) |
| Best NR hit (blastx) | GH24785 [Drosophila grimshawi] (2e-51) |
| GeneOntology terms | GO:0005634 nucleus GO:0003700 sequence-specific DNA binding transcription factor activity GO:0045449 regulation of transcription GO:0043565 sequence-specific DNA binding GO:0006355 regulation of transcription, DNA-dependent |
| InterPro families | IPR017970 Homeobox, conserved site IPR001356 Homeobox IPR012287 Homeodomain-related IPR009057 Homeodomain-like |
| Orthology group | MCL15307 |
Nucleotide sequence:
ATGAGCGGGAGTAGAGTCAAGATAGCGGGTCGCATGGTGCTGGAGGGCGGGCTGCCGGCG
CCGCTGCAGCTGTACGCGGCGGCTGCGGCGCTGCCCCGCCCGGCCTGGCCGCCTTTCCTG
CCCTTCTTCGGGGTCCCGCCGCCCTTCCTCCAGCGGCCGAGACATCCGCCGCCTCACGGA
CCCCCGAGCGAGGACTCCAACGAAGACGCCGCGAGCACTAAAGGTGGTCTCGCTGATGAT
GATGGCGATAGCGGCAAGCGACGCCGCTCCCGCACCAACTTCAACTCCTGGCAGCTGGAG
GAGCTGGAGAGAGCGTTCCTCGCGTCCCACTACCCGGATGTATTCATGAGGGAGGCGCTG
GCGATGCGCCTTGACCTCAAGGAGAGTAGAGTTGCCGTATGGTTCCAAAACCGCCGCGCG
AAGTGGCGTAAGAAGGAGCACACGAAGAAGGGTCCAGGTCGACCAGCTCACAACGCTCAT
CCTCAGAGCTGTTCCGGGGAACCGATCCCACCACACGAGCTGCGAGCCAGGGAGAGGGCG
AGAAGAAGAAAGAAGCTGGCAAAAGCTCTTGAGAGACAGGCGAGGAAGCTTCGAGCCAAA
GGCATCGCGGTAGATCTCGAGGCCTTGAAGGCCGAATATTTAGCACAGCACAGAAACAGC
GGTTTGTACTCCGACTCGGACGGAGACATCGATGGAGAAGAATGTATGATAGATGTAGTC
GGCGGGGACTCCTGCCACGACTCAGGTCCCGAGGACTTCTCACTATCAGGACGTCTCCGA
GCCCCGCCCGGAGCGGACGCTATCAATCATTCAGACAGCTCCACATCGGATGGCCACTCG
GCGCGTAACTTCAGCCCGCTGCCGGACCCGCAGACATCATTCTTCAAACAGTTCACATCA
GCCGCCACAAACTTCGACAAATTCGACTTCGACTCCGGCCGAGCCGTTTCCTTAGACCTC
AGCGGTAGTTCCAACACGGAACAGGGTTTATCCAAGAGCGGGGGCGCGAGGAAGCACAAT
CCGTTCAGTATAGAATCTCTCCTTAACACGTGA
Protein sequence:
MSGSRVKIAGRMVLEGGLPAPLQLYAAAAALPRPAWPPFLPFFGVPPPFLQRPRHPPPHG
PPSEDSNEDAASTKGGLADDDGDSGKRRRSRTNFNSWQLEELERAFLASHYPDVFMREAL
AMRLDLKESRVAVWFQNRRAKWRKKEHTKKGPGRPAHNAHPQSCSGEPIPPHELRARERA
RRRKKLAKALERQARKLRAKGIAVDLEALKAEYLAQHRNSGLYSDSDGDIDGEECMIDVV
GGDSCHDSGPEDFSLSGRLRAPPGADAINHSDSSTSDGHSARNFSPLPDPQTSFFKQFTS
AATNFDKFDFDSGRAVSLDLSGSSNTEQGLSKSGGARKHNPFSIESLLNT