| New model in OGS2.0 | DPOGS200328 |
|---|---|
| Genomic Position | scaffold629:+ 185166-186388 |
| See gene structure | |
| CDS Length | 1131 |
| Paired RNAseq reads | 33283 |
| Single RNAseq reads | 146460 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013945 (0.0) |
| Best Drosophila hit | actin 5C, isoform B (0.0) |
| Best Human hit | actin, cytoplasmic 2 (0.0) |
| Best NR hit (blastp) | actin 5C, isoform B [Drosophila melanogaster] (0.0) |
| Best NR hit (blastx) | actin 5C, isoform B [Drosophila melanogaster] (0.0) |
| GeneOntology terms | GO:0005200 structural constituent of cytoskeleton GO:0005884 actin filament GO:0007010 cytoskeleton organization GO:0007291 sperm individualization GO:0005515 protein binding GO:0005524 ATP binding GO:0000910 cytokinesis GO:0031011 Ino80 complex GO:0006911 phagocytosis, engulfment GO:0032507 maintenance of protein location in cell GO:0005811 lipid particle GO:0005875 microtubule associated complex GO:0016319 mushroom body development GO:0002121 inter-male aggressive behavior |
| InterPro families | IPR004001 Actin, conserved site IPR020902 Actin/actin-like conserved site IPR004000 Actin-like |
| Orthology group | MCL10045 |
Nucleotide sequence:
ATGTGCGACGAAGAAGTAGCCGCGTTGGTAGTGGACAATGGCTCCGGTATGTGCAAGGCC
GGGTTCGCGGGAGACGATGCCCCTCGTGCCGTCTTCCCGTCGATCGTGGGCCGCCCTCGT
CACCAGGGCGTGATGGTCGGTATGGGTCAGAAGGACTCGTACGTCGGAGACGAGGCCCAG
AGCAAGAGAGGTATCCTCACCCTGAAGTACCCCATCGAGCACGGCATCGTCACCAACTGG
GATGACATGGAGAAGATCTGGCACCACACCTTCTACAACGAACTGCGTGTGGCCCCCGAA
GAGCACCCCGTCCTGCTCACAGAGGCTCCCCTCAACCCTAAAGCCAACAGAGAAAAGATG
ACCCAGATCATGTTTGAGACCTTCAACACGCCCGCCATGTACGTCGCCATCCAGGCCGTA
CTCTCACTGTACGCCTCCGGTCGTACCACCGGTATCGTGCTGGACTCCGGAGACGGTGTC
TCCCACACAGTACCCATCTACGAGGGATACGCCCTGCCTCACGCCATCCTGCGTCTGGAC
TTGGCGGGCCGTGACCTCACCGACTACCTGATGAAGATCCTCACTGAACGTGGATACTCT
TTCACCACCACGGCCGAGAGAGAAATCGTTCGTGATATCAAGGAGAAGCTTTGCTACGTC
GCTCTCGACTTCGAGCAGGAAATGGCCACCGCTGCCTCCAGCAGCTCCCTCGAGAAGTCT
TACGAGCTTCCCGACGGACAGGTCATCACCATCGGAAACGAACGATTCCGTTGCCCTGAG
GCTCTCTTCCAACCCTCATTCCTGGGTATGGAAGCATGCGGCATCCACGAAACTACTTAC
AACTCCATCATGAAGTGTGATGTGGACATCCGTAAGGACTTGTATGCCAACACAGTACTG
TCGGGTGGTACCACCATGTACCCAGGCATCGCCGACCGTATGCAGAAGGAAATCACAGCT
CTGGCACCTTCAACCATGAAGATCAAGATCATCGCTCCACCGGAGAGGAAATACTCCGTA
TGGATCGGAGGTTCCATCCTCGCGTCTCTGTCGACATTCCAACAGATGTGGATCTCGAAA
CAGGAGTACGACGAGTCCGGCCCCTCAATCGTGCACAGGAAGTGCTTCTAA
Protein sequence:
MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLD
LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKS
YELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVL
SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK
QEYDESGPSIVHRKCF