| New model in OGS2.0 | DPOGS204602 |
|---|---|
| Genomic Position | scaffold2948:- 201-8153 |
| See gene structure | |
| CDS Length | 1908 |
| Paired RNAseq reads | 429 |
| Single RNAseq reads | 1079 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001614 (1e-32) |
| Best Drosophila hit | meiotic central spindle (3e-14) |
| Best Human hit | zinc finger protein 616 (1e-18) |
| Best NR hit (blastp) | PREDICTED: hypothetical protein LOC100395428 [Callithrix jacchus] (5e-32) |
| Best NR hit (blastx) | PREDICTED: similar to zinc finger protein 91 (HPF7, HTF10) [Canis familiaris] (2e-33) |
| GeneOntology terms | GO:0045449 regulation of transcription GO:0005634 nucleus GO:0046872 metal ion binding GO:0006350 transcription GO:0003677 DNA binding GO:0006355 regulation of transcription, DNA-dependent GO:0008270 zinc ion binding GO:0003676 nucleic acid binding GO:0005622 intracellular GO:0005575 cellular_component GO:0003674 molecular_function GO:0008150 biological_process |
| InterPro families | IPR007087 Zinc finger, C2H2-type IPR015880 Zinc finger, C2H2-like IPR013087 Zinc finger, C2H2-type/integrase, DNA-binding |
| Orthology group | MCL39558 |
Nucleotide sequence:
ATGAAGGAATTCGATATAAATATAGAGGGTTACAACGTGAACGGCATCTGTGTCGGTTGT
CTGAATAGCAACAGGAGGATGTGTTATGTGAGGACGTTCAGCCAGTGTTACAAAATGTTA
GCGGATATAGACGTACCAATTGGTATATCGATCAAGGTGTGCTACGAATGTGCCGCCTTA
ATACGAAAGGTGCTAACATTCAGAGAACAAATTCTTAGATCGTTCGACATACTCAGCGCA
TATTCTAAGAAGCACACGATACTCAATTCGCCAAAAGACCTGACGTGTAACTCAATACAA
AGACTCTCTCGCCATACTTTGAACACGAACCACATGTCCGAGGACGTAGCTATAGACATT
GTGAAGACTGAAGACATATTCGGAGGTTTTCCTCAATTAGAAGAACAGGAATTGAAATCG
GAAATAGGTGATATATTCGTTCAGGAGGATAACTTCGACGGAGTGACGTCAGACGATGAC
GTCACTCTGTCATCTCTCAAAAAGAAGAAAGTTAAGGAGAAGCACACGATACTCAATTCG
CCAAAAGACTTGACATGTAACTCAGTACAAAGACTCTCTCGCCATACTTTGAACACGAAC
CACATGTCCGATGACGTAGCTATAGACATTGTGAAGACTGAAGACATATTCGGCGGTTTT
CAGGAGGAAGGACTGAAGACGGGTATGGGTGATATTTTTGTTCGAGAGGATGCATTCGAT
AGAGTGCCGTCAGATGATGACGTCATGCTCTCCAGCAAGAAGACTAAAAAGAAGAAGAAG
AAAGACAAGAAACAAGAGAAGACACCTCGGAAGCTGAAAAATCTGCCGTCATTCGTGGAG
TTGTATACAATGAGCGAGACAGAGATGTGGAGTGTGAGGGAGAGAGATATAGCGAGCGAA
GAGTTCAGCAGACTGAGGTACAAGTGTGACACCTGTGTGATAGCGTTCAACACTAAGAAA
CTCATGGAGATGCATCAGAGAGGAAAACATGTAGCGAAGAGTGAGTCGGCCCAGCAGTGC
GATGTGTGCACAGCCTACTACCTGACCGCTGAGAACCTCTCCGCACACCGGAAACTGCAT
CTCAACGCTTACAGATGTACAGAATGCGGTCTGGTGTCGTGTGTGAAGAGAGTGATGTCA
GCTCACGACTGCGCCAAGAGAGCCGAGCGGTACAGCTGTGCTGACTGCGACCTCATGTTT
AGTTCTAGATCTCGTCTGTCGTATCACCGGGCCGCGTCTCACGGAGAGAGGCCTCAGTGT
GATTGTTGTGGGAAAATATTCGCCAACAAAATGACACTCAAGTACCACCTCAAAGTGTTG
CCTCAGAATAAAAACGGTACAAGCAAAGAACCAGTGACCATACCGTGTAAAGGATGTGAC
AAAGTCTTCCATTCTAAGAAGAGCTACCGAGCGCACGTTGTGATTCACGACAACCAGTCC
TACCCGTGTCCTACCTGCGGCAAGTTGTTCCAGTGGAAGAGGAACCTTGCGCGTCACGCC
CGCAACCACCGCGAGCGCGCCGCCGGGACCACCCACGCCTGTCACGCCTGCGGGAAGACC
TTCGCGTCCCGGGACTGCTACAATAACCACATGAGACTCAGCAAGAAACACGTGCACGAG
AGTCAGTACACTCACGCCTGTACTTACTGTGGGAAGAAATTCCCAACGAAATGGTGTTTG
GTCGACCACGTGGACTGGGAGCATCTCAAGAGGATAAAATATCAATGCAGTATATGCTTT
AAGGCTTTCAAAACGGCTAAGATAATGTACGCCCATATGAGCAACTTGCACGCGGGCAAG
AGGGTGACGTTGGGGGAACATTTGTGTCATGTTTGTGGGAAGTCTTACAAGGTGAGTGGG
TGTAATAGGGTGAGGGGTGCAGAGGGTGTGATGAGTGCACTCTCATAA
Protein sequence:
MKEFDINIEGYNVNGICVGCLNSNRRMCYVRTFSQCYKMLADIDVPIGISIKVCYECAAL
IRKVLTFREQILRSFDILSAYSKKHTILNSPKDLTCNSIQRLSRHTLNTNHMSEDVAIDI
VKTEDIFGGFPQLEEQELKSEIGDIFVQEDNFDGVTSDDDVTLSSLKKKKVKEKHTILNS
PKDLTCNSVQRLSRHTLNTNHMSDDVAIDIVKTEDIFGGFQEEGLKTGMGDIFVREDAFD
RVPSDDDVMLSSKKTKKKKKKDKKQEKTPRKLKNLPSFVELYTMSETEMWSVRERDIASE
EFSRLRYKCDTCVIAFNTKKLMEMHQRGKHVAKSESAQQCDVCTAYYLTAENLSAHRKLH
LNAYRCTECGLVSCVKRVMSAHDCAKRAERYSCADCDLMFSSRSRLSYHRAASHGERPQC
DCCGKIFANKMTLKYHLKVLPQNKNGTSKEPVTIPCKGCDKVFHSKKSYRAHVVIHDNQS
YPCPTCGKLFQWKRNLARHARNHRERAAGTTHACHACGKTFASRDCYNNHMRLSKKHVHE
SQYTHACTYCGKKFPTKWCLVDHVDWEHLKRIKYQCSICFKAFKTAKIMYAHMSNLHAGK
RVTLGEHLCHVCGKSYKVSGCNRVRGAEGVMSALS