| New model in OGS2.0 | DPOGS200528 |
|---|---|
| Genomic Position | scaffold1740:+ 26718-46616 |
| See gene structure | |
| CDS Length | 2403 |
| Paired RNAseq reads | 1262 |
| Single RNAseq reads | 3381 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009345 (8e-08) |
| Best Drosophila hit | plenty of SH3s (2e-71) |
| Best Human hit | putative E3 ubiquitin-protein ligase SH3RF1 (5e-66) |
| Best NR hit (blastp) | PREDICTED: similar to GA18517-PA [Nasonia vitripennis] (4e-86) |
| Best NR hit (blastx) | PREDICTED: similar to GA18517-PA [Nasonia vitripennis] (8e-82) |
| GeneOntology terms | GO:0008340 determination of adult lifespan GO:0008104 protein localization GO:0045451 pole plasm oskar mRNA localization GO:0008103 oocyte microtubule cytoskeleton polarization GO:0042052 rhabdomere development GO:0030159 receptor signaling complex scaffold activity GO:0005515 protein binding GO:0008270 zinc ion binding GO:0004842 ubiquitin-protein ligase activity |
| InterPro families | IPR017907 Zinc finger, RING-type, conserved site IPR001452 Src homology-3 domain IPR000108 Neutrophil cytosol factor 2 p67phox IPR018957 Zinc finger, C3HC4 RING-type IPR001841 Zinc finger, RING-type IPR013083 Zinc finger, RING/FYVE/PHD-type |
| Orthology group | MCL12813 |
Nucleotide sequence:
ATGGATGAGGGTCTTCTGAATGATCTCCTCGAGTGTTCGGTGTGTCTGGAGAGACTAGAC
ACCTCGTCACGAGTATTGCCATGTCAGCACACATTCTGCCTGAAATGTTTGAAGGTGATA
GTAGAGTCTCACAAGGAGCTGCGTTGTCCAGAATGCCGCGTGCTGGTGGAGGCTCGGGTG
GAGGAGCTGCCTCCGAACGTGCTGCTGATGAGGATCCTCGAGGGCATGAAGAACGCGCCA
AGGAAAACCAGCTCAGCCAGAAATAAGGGCACTCACGCACAGGCTGCGTCAGTAGTACAT
CAGTCAGCCCGTGCGAACAGACAGCCCCCGCCCCACGGCCGTGCTCTATATGATTTCGTC
TCAAAAGAACCAGGTGATCTGTCATTCAAGAAAGGCGAGACTATATTGCTTCAGAAGAAG
TTGGATACGTTCTGGTACCACGGGGAATGTTCTGGAAGGACTGGCATGTTCCCTATTACA
TATGTACAGGTGGTGGTACCACTCCCGGTACCGTCGGCGCTGTGCAAGGCTCTCTACGAC
TTCCGGATGTCGGCTCCTGACGAAGAAGGCTGTCTGGCCTTCGATAAAGGTGCAATAATA
ACAGTTCATCGAAGAGTTGATGAGAACTGGGCTGAAGGTAGACTGGAACAGAGGGTCGGC
ATCTTCCCTATAGCTTTTGTAGAACTGAATCACGCGGCCAGGCTCCTTATGAACAACACT
TCATTGAACCGGCCTGTTCCTCCTATCCCTGAACACTCCAGGGCTGGACACTCTGAACAC
AGATACCATCATCCGCACAGATATCAGCAGATGACGATGTCGACACCGACGGCGGCTGGT
CAAGGGAACTATCAGAATATAGCTACCATGAGTCAATCCCATCCCAACTACCATCAAGCC
ATGGCACAGCAATCTATCCTCGTACCACAGCAAGTGAACCAAGTGAGCAACATCGGCCTG
ATCTCCGCAGTACCCAGGAGCATCATAGAACAGACAAAGAACCCCATAGACATGATAAAC
CATTTCATCAACATGAGCAAACCCCACCAGACCATACAAGTCCAAAGTGTACCGCGTATA
GGTGAGAACTACGACAGACTGCGAGCGGCGAAATTTGATAACTACGCGAACCCCAAAATG
GAAATGACGTATCAGAATGTTAGGGCGGAACAGTTTCCGGTGGCAAGTTTCAATAACGTC
AGCTCCGATTCGAGTTCCAGTGTCACACCGTCTGGTAACGTTGGCGGCAGTTCGACGAAC
ACACCGAACACGAGCTCGAACACCAGCACCTGTGAGAGCGCCGAACCGAGTCTGCCGAGC
TCGCCGGATAATAACACAGAGCGGAATTCAACCGTAACACCATGTAATAACGGCCAAAAT
GAAACTAATGAAACTCCGGATTCACTAAACGCTTCCATTGGAGTGCTGAGTCTGAACGAA
AGTTCCACAGCGACGAATACGTCGCTGAATGTCAGCCTGCCTTCAGAAGGTCCACCGTCG
ACTGCATGCAATGGGAGTAATTCATTGCCAAATCAAGTCGAAAGCCAAGAGGCTGCCGGT
AATAATGAACCTTCGAGATTAGAAATTCCATCGTCGTCGAAGAATGTTCAGACTCGGTCT
AGCGGTCCAGACTCCTTACTTACTTTCGGTCTAGGTCTGCAGGCCGCCTTATCCCCGTCC
CATAAGGAAGGAAACCACATGGTCAGAGGACACCATAAAGAGAGGGAAAAGAGACACAGT
TTGACCCCATCGTCACATTTACAAGGGAACCATACACCAAACAGGCATTCAGCTGAGATT
CTAGCTACGAGTCTTCTAGATACAACGGAACGAGAGAGGCCGGAGAGAGATAGAGATAGA
ACAGAGAGAGAAAGAGAGAGACGGAGACGAAGATCTAGAAGCAACGAGCGTCCCCTACCC
GCCGCCTACATAGCGCTGTACCCTTACAAGCCGCAGAAACCGGACGAATTAGAATTAAAG
AAAGGAGGTATATATACTGTATCGGAACGTTGTCGCGACGGGTGGTACAAAGGTTGCTGC
GAGCGATCCTGTCGTGGCGGCGTGTTCCCCGGGAACTATGTGGCTCCGCTGGCTGCCACT
ACCACCACCCCCACCACCACACGACCCCGACATGAGAAGTCTGTGACGTCATCGGCGAAA
CCAGCGCCGTGTTCTCAAGGCCCCTCCAATGTCTTGGCACCGCCTGACGCTCCACCACGC
GCTACAAGCCCTACAATCACCGGACAACCTTTAACATACCCATGGAGCTCACCCATACAA
CATCAGCAGAACACTCCCAGAGCTGATAAGGTGAGAATTTATATAAACCTTTCTATTATA
CCAATTCTTACTATAATATTAAATAATTATATTAGTCAAGGATATAACAAAAGCTATATT
TGA
Protein sequence:
MDEGLLNDLLECSVCLERLDTSSRVLPCQHTFCLKCLKVIVESHKELRCPECRVLVEARV
EELPPNVLLMRILEGMKNAPRKTSSARNKGTHAQAASVVHQSARANRQPPPHGRALYDFV
SKEPGDLSFKKGETILLQKKLDTFWYHGECSGRTGMFPITYVQVVVPLPVPSALCKALYD
FRMSAPDEEGCLAFDKGAIITVHRRVDENWAEGRLEQRVGIFPIAFVELNHAARLLMNNT
SLNRPVPPIPEHSRAGHSEHRYHHPHRYQQMTMSTPTAAGQGNYQNIATMSQSHPNYHQA
MAQQSILVPQQVNQVSNIGLISAVPRSIIEQTKNPIDMINHFINMSKPHQTIQVQSVPRI
GENYDRLRAAKFDNYANPKMEMTYQNVRAEQFPVASFNNVSSDSSSSVTPSGNVGGSSTN
TPNTSSNTSTCESAEPSLPSSPDNNTERNSTVTPCNNGQNETNETPDSLNASIGVLSLNE
SSTATNTSLNVSLPSEGPPSTACNGSNSLPNQVESQEAAGNNEPSRLEIPSSSKNVQTRS
SGPDSLLTFGLGLQAALSPSHKEGNHMVRGHHKEREKRHSLTPSSHLQGNHTPNRHSAEI
LATSLLDTTERERPERDRDRTERERERRRRRSRSNERPLPAAYIALYPYKPQKPDELELK
KGGIYTVSERCRDGWYKGCCERSCRGGVFPGNYVAPLAATTTTPTTTRPRHEKSVTSSAK
PAPCSQGPSNVLAPPDAPPRATSPTITGQPLTYPWSSPIQHQQNTPRADKVRIYINLSII
PILTIILNNYISQGYNKSYI