New model in OGS2.0 | DPOGS202637  |
---|---|
Genomic Position | scaffold2896:- 19229-20426 |
See gene structure | |
CDS Length | 543 |
Paired RNAseq reads   | 18 |
Single RNAseq reads   | 116 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | ND |
Best Drosophila hit   | CG7840 (7e-35) |
Best Human hit | probable polyprenol reductase (5e-15) |
Best NR hit (blastp)   | GA20623 [Drosophila pseudoobscura pseudoobscura] (1e-42) |
Best NR hit (blastx)   | GA20623 [Drosophila pseudoobscura pseudoobscura] (3e-39) |
GeneOntology terms    | GO:0003865 3-oxo-5-alpha-steroid 4-dehydrogenase activity GO:0005737 cytoplasm GO:0016021 integral to membrane GO:0006629 lipid metabolic process |
InterPro families   | IPR001104 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal |
Orthology group | MCL13690 |
Nucleotide sequence:
ATGTTAAAATTAATTCTTGAGCAAGATGAACCCACAGTTTCTGCAACAGCTAGTCTATTG
GCACTTTCGCTAATTACGATACAGTGTATACGGAGATGCTATGAAACTTACTACCTACAA
GTGTTTGCTAGCTCAAGTAAAATGAATCTCAGCCATTATATAGCTGGTATTGTACATTAC
TTTGCGGTTGTAGTGGCTGCAATTGGACACTTAATTTTCATGTGGGCTTGGTACGAACAG
TACAAGAGCAATATTATATTTGCTAACTTACGAAAAGACAAGAAATCAGGCAAAGTGGTG
ACCGAAGATCACAAGATACCTTATGGACGGCTGTTTGAACATGTATCGAGTCCACACAGA
ATGTGTGAAGTGATTATGTACATTGTACTGCTACTATTAGTACCCACTAGGACCTTCTTC
TGTATTTTCTTGTGGGTTATTTGTAACCAGGTACAAACAGCGATTCATGCTCATGTATGG
TACAAAAAGACGTTTAAAGACTATCCGAGTAATAGGACAGCCATTGTTCCTAAATTATTA
TAA
Protein sequence:
MLKLILEQDEPTVSATASLLALSLITIQCIRRCYETYYLQVFASSSKMNLSHYIAGIVHY
FAVVVAAIGHLIFMWAWYEQYKSNIIFANLRKDKKSGKVVTEDHKIPYGRLFEHVSSPHR
MCEVIMYIVLLLLVPTRTFFCIFLWVICNQVQTAIHAHVWYKKTFKDYPSNRTAIVPKLL