New model in OGS2.0 | DPOGS202679  |
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Genomic Position | scaffold2896:+ 9063-11268 |
See gene structure | |
CDS Length | 474 |
Paired RNAseq reads   | 4866 |
Single RNAseq reads   | 16968 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA001302 (4e-70) |
Best Drosophila hit   | vacuolar H[+] ATPase 16kD subunit, isoform D (5e-71) |
Best Human hit | V-type proton ATPase 16 kDa proteolipid subunit (1e-57) |
Best NR hit (blastp)   | hypothetical protein LOC100162391 [Acyrthosiphon pisum] (3e-74) |
Best NR hit (blastx)   | hypothetical protein LOC100162391 [Acyrthosiphon pisum] (1e-75) |
GeneOntology terms    | GO:0000220 vacuolar proton-transporting V-type ATPase, V0 domain GO:0008553 hydrogen-exporting ATPase activity, phosphorylative mechanism GO:0015992 proton transport GO:0015986 ATP synthesis coupled proton transport GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) GO:0033227 dsRNA transport GO:0045169 fusome |
InterPro families    | IPR000245 ATPase, V0 complex, proteolipid subunit C IPR002379 ATPase, F0/V0 complex, subunit C IPR011555 ATPase, V0 complex, proteolipid subunit C, eukaryotic IPR000454 ATPase, F0 complex, subunit C |
Orthology group | MCL15334 |
Nucleotide sequence:
ATGGCCGAGTCAAATCCTATCTATGGACCCTTCTTTGGAGTTATGGGGGCGGCGTCTGCT
ATCATTTTCAGCGCCCTGGGAGCCGCCTATGGAACGGCTAAGTCAGGTACCGGTATCGCT
GCTATGTCTGTGATGCGGCCTGAGCTGATCATGAAATCTATCATTCCCGTTGTCATGGCG
GGTATCATTGCCATCTACGGTCTGGTCGTGGCTGTGCTGATTGCTGGATCCCTCGAACCC
CCAGCAACCTACTCCCTTTTCAAAGGGTTCATCCATTTGGGTGCCGGTCTCGCTGTAGGC
TTCTCTGGTCTGGCCGCTGGTTTCGCCATAGGCATTGTGGGTGATGCCGGTGTCCGCGGC
ACAGCCCAGCAGCCGAGGTTATTCGTGGGAATGATCCTTATCCTCATTTTCGCCGAAGTG
TTGGGTCTATACGGTCTCATCGTCGCCATCTACCTTTACACGAAACAGAGTTAA
Protein sequence:
MAESNPIYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMA
GIIAIYGLVVAVLIAGSLEPPATYSLFKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRG
TAQQPRLFVGMILILIFAEVLGLYGLIVAIYLYTKQS