| New model in OGS2.0 | DPOGS213665 |
|---|---|
| Genomic Position | scaffold607:- 40452-48812 |
| See gene structure | |
| CDS Length | 915 |
| Paired RNAseq reads | 379 |
| Single RNAseq reads | 1467 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010616 (5e-41) |
| Best Drosophila hit | CG4291 (6e-32) |
| Best Human hit | WW domain-binding protein 4 (4e-15) |
| Best NR hit (blastp) | WW domain binding protein 4 [Bombyx mori] (4e-66) |
| Best NR hit (blastx) | WW domain binding protein 4 [Bombyx mori] (2e-65) |
| GeneOntology terms | GO:0017058 FH1 domain binding GO:0005686 U2 snRNP GO:0030532 small nuclear ribonucleoprotein complex GO:0000398 nuclear mRNA splicing, via spliceosome GO:0003676 nucleic acid binding GO:0008270 zinc ion binding GO:0071011 precatalytic spliceosome |
| InterPro families | IPR001202 WW/Rsp5/WWP IPR000690 Zinc finger, C2H2-type matrin IPR013085 Zinc finger, U1-C type IPR003604 Zinc finger, U1-type |
| Orthology group | MCL14726 |
Nucleotide sequence:
ATGCACACAATGCAAGCCATAACAGAATGTAGACATTCCCCGCTTTATTTTAGTCACAGT
TCTAGATCTTTCCATGGGAAGGAAAGCCAGTTGCAAATATTGTTTGTTTTGACGACTTAC
TGGAAGTCACAGGATCGCAAGTATTGTGAGTTTTGCAAGTGTTGGCTTGCTGATAATAAA
GTGTCTATATCATTTCACGAAAATGGCAAAAGGCACAAAGAGAGCCTCAAGAAACATTTA
TCAGATCTCAGCAAGAGGAGTGCAAAAGAATTCAAACAGAATCAAAAAATGGAGGATGAC
ATCAAACAAATGGAAAAAGCAGCCATGCGTGCTTATGCCAAGGATATTCAAAACAATGCT
GACTTGACATCACAAAACATAAACGAGATATTGGAACTTAGCGGCAACAGCAAAACAATA
GCCCCAGCACCGAGTGTCGAAGAGAAGAGTGAATGGAAGGAAATGAAAAACGACAAGGGA
AGAACATATTACTGGAACAGCAAAACGGATGTATCCACATACGACCCACCACCTAACTTC
ATTTCAACAGTGAAAAAAGAAAACAAAAAGCTTAAACCTAAAAAGATAAAAGATAAGCAC
AAAAAGCAAAAAACAGATGGCGCTATGAGTAATATGGATACGGTGAAGTTGGAAGAATTT
GGTCCAATGCCCTGTGGTAAACCATATGGCTCATGGAAACCAGTTGTCAAAGAGGTAGTC
AAAGAGGTTGATTTGCAACTTCCTAAAGTGGAAAGACAAAAGCCACTTCCGCCAGTTCTG
TTAGAACCAGAACACACACCAATAGAGTTCAAAGAGAGTAAAGTTGATTACTCTTTAGAG
GGTCCATCGGAGTTCAAGAAACGTAAGTTGAATAACCCCAAACGGAACATGCGACAGAGA
TTGGACGATGAATAA
Protein sequence:
MHTMQAITECRHSPLYFSHSSRSFHGKESQLQILFVLTTYWKSQDRKYCEFCKCWLADNK
VSISFHENGKRHKESLKKHLSDLSKRSAKEFKQNQKMEDDIKQMEKAAMRAYAKDIQNNA
DLTSQNINEILELSGNSKTIAPAPSVEEKSEWKEMKNDKGRTYYWNSKTDVSTYDPPPNF
ISTVKKENKKLKPKKIKDKHKKQKTDGAMSNMDTVKLEEFGPMPCGKPYGSWKPVVKEVV
KEVDLQLPKVERQKPLPPVLLEPEHTPIEFKESKVDYSLEGPSEFKKRKLNNPKRNMRQR
LDDE