DPGLEAN13280 in OGS1.0

New model in OGS2.0DPOGS213701 
Genomic Positionscaffold607:+ 45072-47834
See gene structure
CDS Length1323
Paired RNAseq reads  5948
Single RNAseq reads  15604
Migratory profilesQuery via corresponding ESTs
Best Bmobyx hitBGIBMGA010673 (0.0)
Best Drosophila hit  maternal expression at 31B, isoform A (0.0)
Best Human hitprobable ATP-dependent RNA helicase DDX6 (2e-172)
Best NR hit (blastp)  PREDICTED: similar to DEAD box ATP-dependent RNA helicase [Nasonia vitripennis] (0.0)
Best NR hit (blastx)  PREDICTED: similar to DEAD box ATP-dependent RNA helicase [Nasonia vitripennis] (0.0)
GeneOntology terms




  
GO:0004004 ATP-dependent RNA helicase activity
GO:0005524 ATP binding
GO:0003723 RNA binding
GO:0000932 cytoplasmic mRNA processing body
GO:0033962 cytoplasmic mRNA processing body assembly
GO:0005875 microtubule associated complex
InterPro families



  
IPR014001 DEAD-like helicase
IPR001650 Helicase, C-terminal
IPR014014 RNA helicase, DEAD-box type, Q motif
IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site
IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal
Orthology groupMCL15606

Nucleotide sequence:

ATGATGACTGAAAATAGAATTAGTTCAAGTAATCACGTCGGAAACATGAGCAGTCAGAAA
GGAGAAGTCGATAAAACTGTAGAAGATATTGGGTGGAAAGCAAAATTAAAACTACCCCCC
AAAGACAGAAGACTTAAAACCAGTGATGTAACTGACACAAGAGGAAATGAGTTTGAAGAG
TTTTGTCTTAAAAGAGAAATTTTGATGGGAATTTTTGAAAAGGGATGGGAGAAGCCATCT
CCTATTCAAGAGGCTTCAATTCCCATTGCACTTAGTGGTAAAGATGTTCTGGCCAGAGCA
AAGAATGGTACTGGCAAGACAGGCGCTTATTGTATTCCAGTTTTAGAACAGGTTGATCCA
AAAAAAGATGCTATACAAGCACTTATAGTGGTGCCGACCAGAGAGTTAGCACTGCAGACA
TCACAAATTTGCATTGAACTGGCAAAACACACAGACATTCGTGTAATGGTCACCACGGGA
GGAACTAACTTAAGAGATGATATAATGCGCATTTATCAAAATGTCCAAGTAATAATAGCC
ACACCAGGGCGTATGATTGATCTCATGGATAAACAAGTAGCCAAGATGGACCAGTGCAGG
ATGCTTGTGTTAGATGAAGCGGACAAACTCCTCTCTCAGGACTTCAAAGGCATGTTGGAT
ACTGTTATCTCACGGCTACCAAAAGAACGTCAAATTTTGCTATTCTCAGCAACCTTTCCA
CTAAATGTAAAAAAGTTTATGGAGAAACATTTAAGAGAACCATATGAGATTAATCTCATG
GAAGAATTAACATTGAAAGGAGTCACACAATACTATGCATTTGTACAAGAAAGACAGAAA
GTGCATTGCTTAAATACACTCTTTTCAAAGTTACAAATTAACCAGTCTATTATATTCTGT
AATTCGACCCAGCGCGTAGAGTTGCTCGCTAAGAAGATAACGGAGTTGGGTTACTGTTGC
TACTACATACACGCACGTATGGCTCAGGCGCACCGCAACCGCGTGTTCCACGACTTCAGG
GCGGGGTTGTGTCGCAACTTGGTGTGTTCGGATCTGTTCACTCGCGGTATAGACGTCCAG
GCTGTGAACGTGGTTATAAACTTCGACTTCCCGCGCATGGCGGAGACCTACTTGCATCGC
ATCGGTCGCTCCGGCCGCTTCGGCCATCTCGGTATCGCAATCAACCTCATCACTTATGAG
GATCGCTTTGCGCTTCACCGCATCGAGCAGGAACTGGGCACTGAGATCAAACCTATACCC
AAGGTGATCGATCCCGCCCTGTACGTGTCCCGCCCCGACGAAGACGACTCGGCAGATAAG
TAA

Protein sequence:

MMTENRISSSNHVGNMSSQKGEVDKTVEDIGWKAKLKLPPKDRRLKTSDVTDTRGNEFEE
FCLKREILMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDP
KKDAIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQVIIA
TPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLDTVISRLPKERQILLFSATFP
LNVKKFMEKHLREPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSKLQINQSIIFC
NSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRAGLCRNLVCSDLFTRGIDVQ
AVNVVINFDFPRMAETYLHRIGRSGRFGHLGIAINLITYEDRFALHRIEQELGTEIKPIP
KVIDPALYVSRPDEDDSADK