| New model in OGS2.0 | DPOGS213702 |
|---|---|
| Genomic Position | scaffold607:+ 52629-58964 |
| See gene structure | |
| CDS Length | 1998 |
| Paired RNAseq reads | 1344 |
| Single RNAseq reads | 2853 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010615 (0.0) |
| Best Drosophila hit | Trim9 (1e-124) |
| Best Human hit | E3 ubiquitin-protein ligase TRIM9 isoform 1 (5e-115) |
| Best NR hit (blastp) | PREDICTED: similar to Trim9 CG31721-PA [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to Trim9 CG31721-PA [Tribolium castaneum] (3e-155) |
| GeneOntology terms | GO:0008270 zinc ion binding GO:0005622 intracellular GO:0005515 protein binding |
| InterPro families | IPR013083 Zinc finger, RING/FYVE/PHD-type IPR013783 Immunoglobulin-like fold IPR001841 Zinc finger, RING-type IPR001870 B302/SPRY domain IPR003961 Fibronectin, type III IPR008985 Concanavalin A-like lectin/glucanase IPR008957 Fibronectin type III domain IPR003877 SPla/RYanodine receptor SPRY IPR000315 Zinc finger, B-box IPR003649 B-box, C-terminal IPR018355 SPla/RYanodine receptor subgroup |
| Orthology group | MCL11703 |
Nucleotide sequence:
ATGGAAGAAGAACTAAGATGTTTTATATGTAAGGAGTTCTACAGAGAGCCGGTGCTGATG
CCTTGTGGACATGCACTCTGCCGAGCATGTGCTGTGGGTTTACAAACGCATGTACATGAA
AATGACAATGCGAGTGCCGTTTCACACGACTTTCAGGAGGCTGATAAGGCCTCTGTATCT
AGTGAGACAGATAGTGGGGTTGTTTGTGGGTCTAGACCTAACAGTTATGCAGGAACTCCT
GCTACATCGACGTATACAACGGCTACTTTTAGTATAATATGTCCATTTTGCAACAAACAA
GTATATCTTGATGACAGTGGTGCTGAAGGCCTTCCACCTTTTCGCGTCATGCGAACAATA
GTCGAACGTTTTGGTGGAGTCAGTGTGGCCCCGCCAGCTGAGGAGGCATGTCAAATGTGT
GAAGGAGAACGGCGGGCGGCTGTAGTACGTTGTGAACAGTGTTCAGTACGGTACTGCGCG
GGATGCAGAGATGCTTGGCACCCTACTAGAGGTCCTCTCGCCCAGCATGAGCTAAGGGCA
TTAGGAACAACATGTACAGATCATGGATGCACCCCTGTATTATTTTGTAATACATGTCTA
CTACCTATCTGTCAACGATGCTTGGCAGAAAGACATGCCTCTCATGAAACTCAACATTTA
TCCAGTGCAGCTAGATTACATAAGACAGAATTATCACAAACACTCCACCAGTTATCAGAA
GAAGCCAAGGCCATGACTGAGTATATACAGCTTGTGAAGAGCTCCGGAGACAAAATTAAT
GAATCATGCGAAGAATTAGAAAATCAAATAGATCAGGCATGTGCTGAAATAACGCGTGCC
GTAGAAAGACGGAGAGATGAATTAATACGGGCGGCTCGTAATACAAGGTCACAGGCTGTG
GCTGGTATGCGCGTGATGACGTCACAGGCCGCACAGAAACTTAGAGAGGCCACTGCACTG
TTGCATTTTTCTATAGAAGCTCTGAAAGAATCGGATCATGCCGCCTTCTTGCAGGTCGGT
AAGATACTGTCAGTCCGAGCTCGCGACACAGCCTCGAACCTACGATCATCCCTGGAGACT
CCGCCGGCGCCGCCGGCACTCACACTCGACATAGAGCCCGTCTTGAGAACCGTCAATACT
ATGAACTTCATTGAGTGTATACCCCCAGGTGCTCCCGAGATGGCCGTGGAGGCATGTGCA
GCTCGCGGCTGTTCGTGTACTCTGGCTTGGCGTGCTCCAGCGGCGCCACGAGCCGTGCGC
GGGTACGTGCTGGAGTTGGACGACGGTCTGGGCGGACCGTTCAGAGAGGTGTACTGCGGC
CGTGAGACGGTTTGCACAATCGATGGCTTGCATTACGCGTCGCTATACAGTGCTAGAGTG
AAGGCGTTCAACGGAGCTGGTGAGGGACCTTACAGCGAGGTCATCGGCCTACAAACATCA
CCTGTCGCGTGGTTCACATGGGACGCTCGTTGCGGGGTGGGGGGCGTGGGCGGCGAGGGG
GGGCTGGTGATAGGGTCCGAGGGTCTGAGCGCTCGGGCTGCGGGCTGGCAGCCGCGGGTC
GCCCTCGCTGACCAGCCGCTTGCCCGCGGCCTGCACTACTGGCGGCTGCGGATCGATCAC
TACGACGGCGACGCGGACCCGGCCTTCGGAGTCGCCAGGGCGGACGTGGCCAGGGACAAG
ATGCTAGGTAGTGACGCGCTCGGCTGGGCGATGTATATAGATGGTTCGCGCTCGTGGTTC
GTCCACGGCGGAGCTCACGGCGGCAGAGCTGCCGGCGGGATAGCACACGGCTCCACTGTT
GGCGTCCTGCTAGACCTTACACGAGGCACCCTGAGGTTCACGGTCGACGATCGCCCCCAG
GGTGATATCGCGTTCACTGGTCTGCGGGGTGCGTTTTACCCGGCGGTGTCCTTGAACAGG
GGTGTGGGTGTGACGCTCCAGCCAGGGCTGCCACCGCCACCTGACTTACTGGACATAGCC
GGCATCAGTATACAGTAG
Protein sequence:
MEEELRCFICKEFYREPVLMPCGHALCRACAVGLQTHVHENDNASAVSHDFQEADKASVS
SETDSGVVCGSRPNSYAGTPATSTYTTATFSIICPFCNKQVYLDDSGAEGLPPFRVMRTI
VERFGGVSVAPPAEEACQMCEGERRAAVVRCEQCSVRYCAGCRDAWHPTRGPLAQHELRA
LGTTCTDHGCTPVLFCNTCLLPICQRCLAERHASHETQHLSSAARLHKTELSQTLHQLSE
EAKAMTEYIQLVKSSGDKINESCEELENQIDQACAEITRAVERRRDELIRAARNTRSQAV
AGMRVMTSQAAQKLREATALLHFSIEALKESDHAAFLQVGKILSVRARDTASNLRSSLET
PPAPPALTLDIEPVLRTVNTMNFIECIPPGAPEMAVEACAARGCSCTLAWRAPAAPRAVR
GYVLELDDGLGGPFREVYCGRETVCTIDGLHYASLYSARVKAFNGAGEGPYSEVIGLQTS
PVAWFTWDARCGVGGVGGEGGLVIGSEGLSARAAGWQPRVALADQPLARGLHYWRLRIDH
YDGDADPAFGVARADVARDKMLGSDALGWAMYIDGSRSWFVHGGAHGGRAAGGIAHGSTV
GVLLDLTRGTLRFTVDDRPQGDIAFTGLRGAFYPAVSLNRGVGVTLQPGLPPPPDLLDIA
GISIQ