| New model in OGS2.0 | DPOGS216016 |
|---|---|
| Genomic Position | scaffold439:- 223193-224911 |
| See gene structure | |
| CDS Length | 1719 |
| Paired RNAseq reads | 191 |
| Single RNAseq reads | 616 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001084 (0.0) |
| Best Drosophila hit | meiotic recombination 11 (3e-95) |
| Best Human hit | double-strand break repair protein MRE11A isoform 1 (1e-81) |
| Best NR hit (blastp) | meiotic recombination 11 [Bombyx mori] (0.0) |
| Best NR hit (blastx) | meiotic recombination 11 [Bombyx mori] (0.0) |
| GeneOntology terms | GO:0004519 endonuclease activity GO:0006302 double-strand break repair GO:0004527 exonuclease activity GO:0006289 nucleotide-excision repair GO:0030145 manganese ion binding GO:0005634 nucleus GO:0000723 telomere maintenance GO:0051276 chromosome organization GO:0031572 G2/M transition DNA damage checkpoint GO:0006974 response to DNA damage stimulus GO:0016233 telomere capping |
| InterPro families | IPR003701 DNA repair exonuclease IPR007281 Mre11, DNA-binding IPR004843 Metallo-dependent phosphatase |
| Orthology group | MCL12121 |
Nucleotide sequence:
ATGGTTTTGCTAGGTGGAGACCTGTTTGATCACGCCAAACCCTCGCCGAGTTGTATGTTT
AAATGTACTCAAATTATTCGTAAATACTGCTTCGGAGATAAACCCATAAGTATTGAAGTC
GTATCAAATCAGTTTGACAATTTTTCACGAGCCGTAAATTATGAAGATCCAAATTTAAAT
GTTTCCTATCCTTTACTTTCCATTCATGGAAACCATGATGATCCAGTGGGACAAGGCAGT
GTTAGTTCTTTGGATATATTGTCTATTACTGGTCTTGTCAATTATTTTGGTAAATGGACT
GATTACACTCATGTACGTATCTCACCAGTGCTCATACAAAAAGGTGAAACAAAACTATCC
TTGTATGGTTTGAGTCATTTAAAAGATCAAAGACTAGCAAGATTGTTTATTGAAAAGAAA
GTAGAAATGGAATTGGTTGACAATGGTAATGATTGGTTTAATATTCTTGTTTTACATCAA
AACAGGGCTGATAGAGGCCCCAACAATTATATACCAGAAAATGTTTTACCCACATTTTTA
GATCTCGTTATCTGGGGTCATGAGCATGACAGCCAAGTTTTTCCTATTAAGGATATAAAA
AGGGAAAATGAAGGATTTTTTGTTATTCAACCAGGAAGCACTGTAGCAACATCACTTGCT
GCAGGTGAGGCATTACCCAAACACTGTGTGTTACTCCAATTACATAAAAAGGAATACATA
GTGACTCCAATACCACTTAAAACTATACGTCCATTTATATTTAAGACTATAGTTCTATCA
GAAGAAAATTTGGGTGATGAAGATGTTAATGAAACTGAAAAAGTACAACAATTTTTAAAA
GGTAAAGTTAATGAAGCCATACAGGAAGCAGAAGGACTGCGCAGTGGTGACCCTAAACAG
CCTTTGTTACCTCTTATTAGACTTAGTGTGTTCTATGAACACGATGGACAAGATTTTAAT
AGGGTAAGGTTCGGACAAAATTTTAATGGTCTTGTGGCAAATCCTAATGATGTCCTTATA
ATGAAAAGAGAAAAGAAATTACGAGAAAGAAAGGAACGTTCAAATATGATAGAAGATTCA
GACATAATTGGTGTAGCCTCTGATGCGACAGATGTCGAGTCTTTGCTTCGAACGTATTAT
GAAAATCTACCTCAGGATCGTCGGCTCGCAGTTCTTTCCGTACGCGCACTCACAGAGGCT
GTTAGAGATTTTACTATAAAACGGGACGATGATGTATTTCGTCGGGTACTAGATGCCCAT
AGAAAAAGATGTGTAGATTCGTTGCTTGAATCAAACGCTGAAACACCAGAAGAAATAGGA
GAACACCTTAAAACGTGCAAAGCTACACTGGATATGGCGGATGGTGATAGGCTAAGGACT
ATGATTGCTACTGTGGCAGTTAAAGCTAAAGAGGAGTCAAGTAAGCAAAATTCAGAGCAC
ACGAAAAATGTTTCAATAGTTCTATCGAGTGATGACGAAGCACCTGTGGGACGAGGAAGA
GGTCGGGGTTCTCGTGGCGCAAGAGGACGGGGCAGGGGACGTGCCGCAGGAAGAGGACGT
GGCTCTTCTGCCCCTGTGCCCTCTACAGAGGTGACCCCAGAACGCCGTACGCCGCGTAGG
ACAGCGGCACAGAAAACTAACAATTGGTTTCAAACCCTTGCAGCTGATAGGTCTTCGCGG
CGCCGTCGCGAATCCTCGGAAATTGAAATGTCTGATTAA
Protein sequence:
MVLLGGDLFDHAKPSPSCMFKCTQIIRKYCFGDKPISIEVVSNQFDNFSRAVNYEDPNLN
VSYPLLSIHGNHDDPVGQGSVSSLDILSITGLVNYFGKWTDYTHVRISPVLIQKGETKLS
LYGLSHLKDQRLARLFIEKKVEMELVDNGNDWFNILVLHQNRADRGPNNYIPENVLPTFL
DLVIWGHEHDSQVFPIKDIKRENEGFFVIQPGSTVATSLAAGEALPKHCVLLQLHKKEYI
VTPIPLKTIRPFIFKTIVLSEENLGDEDVNETEKVQQFLKGKVNEAIQEAEGLRSGDPKQ
PLLPLIRLSVFYEHDGQDFNRVRFGQNFNGLVANPNDVLIMKREKKLRERKERSNMIEDS
DIIGVASDATDVESLLRTYYENLPQDRRLAVLSVRALTEAVRDFTIKRDDDVFRRVLDAH
RKRCVDSLLESNAETPEEIGEHLKTCKATLDMADGDRLRTMIATVAVKAKEESSKQNSEH
TKNVSIVLSSDDEAPVGRGRGRGSRGARGRGRGRAAGRGRGSSAPVPSTEVTPERRTPRR
TAAQKTNNWFQTLAADRSSRRRRESSEIEMSD