| New model in OGS2.0 | DPOGS215965 |
|---|---|
| Genomic Position | scaffold439:+ 246441-251779 |
| See gene structure | |
| CDS Length | 2631 |
| Paired RNAseq reads | 9774 |
| Single RNAseq reads | 23240 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000528 (2e-26) |
| Best Drosophila hit | NAT1, isoform C (3e-65) |
| Best Human hit | eukaryotic translation initiation factor 4 gamma 2 isoform 2 (2e-76) |
| Best NR hit (blastp) | PREDICTED: similar to eukaryotic translation initiation factor 4 gamma, 2 [Tribolium castaneum] (6e-180) |
| Best NR hit (blastx) | PREDICTED: similar to eukaryotic translation initiation factor 4 gamma, 2 [Tribolium castaneum] (2e-123) |
| GeneOntology terms | GO:0005515 protein binding GO:0016070 RNA metabolic process |
| InterPro families | IPR016021 MIF4-like, type 1/2/3 IPR003307 eIF4-gamma/eIF5/eIF2-epsilon IPR016024 Armadillo-type fold IPR003890 MIF4G-like, type 3 |
| Orthology group | MCL12142 |
Nucleotide sequence:
ATGACCGCTGAGGCGCGTTCAGCCAGCGCCACCTGGGGGTGCAGCCTGCAGCTAGCTGTC
GGTTGTGAGAGGCGAGTTGTGTGCGCGATCGCGGGCGTGTTCGCGTGTGCGTGCGGACGG
TCGTGCGGCGGTGGTGTGTGTGTGAGGCGGCGACACCGGCCGCAAGAGGTCCCCCCGAGG
CGGCGCTGGGTCCCGCCATCCACGCAGCGGCACCACGATGTGCCCGACGGCGAAGCCAAG
CACGACATCATCCATAGGAAAGTGCGTGGCATACTTAACAAACTCACGCCGGAGAAATTC
CAAAAGCTGAGCGATGATCTACTCGCATTGGAATTGGATTCGGACAAGGTGCTGAAGGGG
GTGATCCTTCTAATATTCGACAAGGCACTTGATGAACCTAAGTACTCGTCGATGTACGCT
CAGCTGTGCAAGCGGCTCAGCGAAGAGGCGCCCAACTTTGAGCCGCCCGGCTCCCCCTGT
ACTTTCAAGCTGCTCCTGCTCAACAAATGTCGCACCGAATTCGAAAACCGCGCCCAGGCA
TTCGCAGCCTTCGAAGACAAGGCTCTCACTCCTGAGGAAGAGGAGAAACGGCATTTAGCC
AAGTGTAAAATGCTCGGCAACATCAAATTCATCGGCGAACTGGGCAAGTTGGAGATCCTC
GCGGAGTCGATCCTTCACCGTTGCATCCAGAACCTGCTGGCTCGCCGCGCTGCCGCCGAG
CACCATGAAGACCTGGAGTGTCTGGCGCAGCTGGTGCGGACATGCGGCCGCGTGCTCGAC
TCAGAGCGCGGCCGCGGTCTCATGGATCAATATTTCGCACGAATCGAAACGTTGTCCAAC
TCGCGCGACCTCGCCCCTCGCATCCGGTTCATGTTGCGGGACGTGGTGGAGCTGCGACGC
TCAGGTTGGCTGCCACGCACGGCGGTGTCAGCCGAGGGCCCGGTGCCCATACACCAGTTG
CGCGCCGACGACGAGCCACCGCCTCGCCGCGAGCGCGAGCGGGAGCGCGACTCTCTGTTC
AGGGGCGGGATGCGCTCGCGGCCCCTGGACGACGTGCTGGCCGGTCTCAGCCTGCAGCCA
GCCGCCGCGCTCGTGCCGCCGCCGGACAAATTGTTCGGGAACGGTTTCGCTCCGCCGGCT
TTCCGCCAGCGCTCGGCGCCCGGCTACTACCCGCGCTCGCATTACAAGCACCAACAGCAT
CAGCACGCGCCCTCCGCGGGCAAGGAGGGCTCGCGCTCCGGCAAGGCTCGTGTGGCGGTG
GCAGCGGGCGCTCTGCAAGACGTCCAGATGCGCCCCGCCGCCAACTCTCTCATGTTCACG
GCCAACAGGCTGTCTCGCCCTCCGCCCTCGCAGCTGCCACTCGCCTCCCAAAACGTGCTG
ACGCCAACATTCGCCAGTGCTCCGCCTCTTATGAAAGAGCCCTCCATCACTATCAAGCCC
GCGCCCGACAAAAAGGATAAACCGAAAAAGGACAAGGGGTTGAACAAGGAGGAGGCGTGT
CGCCTGGGCATCGAAGCGGTGAGTGCGCTGGCTGACAGCGACGAACGCATCGACCAACCG
GAGCCGGAGCCCGAGCAAGAGCACGAGCCGACGCTGGCGGCGCCTCTGCGGCGTCTGCAC
GACCTCCAGCTGCCCGACAAGTTGCTAAGGCGCGTCATCGCCGCGGTGCTGGAGCACGCG
GTCACGGCAGACATACGACCGCCGGCTGACAACGACACCGAACCAGACGGTGACGCCAAT
GATGAAGACGAGCGTGTGACTCGTCTGCTCTGGGCCGCCTGTAGTGTGGTGCGCGCTGTT
AAACGAGCGCCCCTGGGCGAGCCGCTCAGGGCGCTCCTGCAGGCGCACCACCCCCACCGC
CGTCTACCCGGCCTTCTGGCACACGCCATCAGACAGAAGTTAATATCGCTGTCAGAAGTA
GGCACGTGGTGCGAGGGTGGTCAGTATCACCCGTTATTACTGGAAGTGCTGCAGTCCCTA
CGAGAACTCGTCGGCCTGGAGCGCCTACAAGACATGCTCGAGGATAGTAAGGTGAACCTA
TGCGCCTATGTGTCGGAGCGGGAGGGTGGTGCGGGCGGTCTTGATGCTCTGGAGGCTCGC
GGTCTCGGCGCGTTGGTGCCGCAGCTGCGGGTGCAGGCGGCGTTGGCGCGACAGCTGGCC
ACGGAGCCGGCTCCGACCGCGCTCTACCGCTGGATCAAGGCCAACGTGGAACCCTCCGTG
AGACACAACGCCGCATTCGTGTCAGCGTTGGTGGCGCTGGTCGCGGAGCACGTGACGGCG
GCGGCGGGCGGCGCCTCGCCGGACAAGGCTGCACTCGAACGTGAGAAAGCGCTGGCCGAG
GCCTACGCTCCACTCCTGACAGCCCTGCTCGAGGGCCGCTCTGATCTACAGCTTGCGGCC
GTATACGCCGTGCAGGTGCATGCACACCATCATCGGTACCCTAAAGGTATGTTGCTACGC
TGGTTCATGTACCTGTATAACTTGGAGGTATGCGAGGAAGACGCTTTCCTGCGCTGGCGC
GAGGACGTCACCGATGCCTACCCTGGTAAGGGAGAGGCTCTGTTCCAGGTGAATACGTGG
CTGACATGGCTTCAGCAACAGGAGTCCGAGGACGAGGAGGCAGAGGACTGA
Protein sequence:
MTAEARSASATWGCSLQLAVGCERRVVCAIAGVFACACGRSCGGGVCVRRRHRPQEVPPR
RRWVPPSTQRHHDVPDGEAKHDIIHRKVRGILNKLTPEKFQKLSDDLLALELDSDKVLKG
VILLIFDKALDEPKYSSMYAQLCKRLSEEAPNFEPPGSPCTFKLLLLNKCRTEFENRAQA
FAAFEDKALTPEEEEKRHLAKCKMLGNIKFIGELGKLEILAESILHRCIQNLLARRAAAE
HHEDLECLAQLVRTCGRVLDSERGRGLMDQYFARIETLSNSRDLAPRIRFMLRDVVELRR
SGWLPRTAVSAEGPVPIHQLRADDEPPPRRERERERDSLFRGGMRSRPLDDVLAGLSLQP
AAALVPPPDKLFGNGFAPPAFRQRSAPGYYPRSHYKHQQHQHAPSAGKEGSRSGKARVAV
AAGALQDVQMRPAANSLMFTANRLSRPPPSQLPLASQNVLTPTFASAPPLMKEPSITIKP
APDKKDKPKKDKGLNKEEACRLGIEAVSALADSDERIDQPEPEPEQEHEPTLAAPLRRLH
DLQLPDKLLRRVIAAVLEHAVTADIRPPADNDTEPDGDANDEDERVTRLLWAACSVVRAV
KRAPLGEPLRALLQAHHPHRRLPGLLAHAIRQKLISLSEVGTWCEGGQYHPLLLEVLQSL
RELVGLERLQDMLEDSKVNLCAYVSEREGGAGGLDALEARGLGALVPQLRVQAALARQLA
TEPAPTALYRWIKANVEPSVRHNAAFVSALVALVAEHVTAAAGGASPDKAALEREKALAE
AYAPLLTALLEGRSDLQLAAVYAVQVHAHHHRYPKGMLLRWFMYLYNLEVCEEDAFLRWR
EDVTDAYPGKGEALFQVNTWLTWLQQQESEDEEAED