| New model in OGS2.0 | DPOGS214561 |
|---|---|
| Genomic Position | scaffold1254:+ 61075-69368 |
| See gene structure | |
| CDS Length | 2238 |
| Paired RNAseq reads | 3412 |
| Single RNAseq reads | 10039 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010088 (1e-72) |
| Best Drosophila hit | CG3499 (0.0) |
| Best Human hit | ATP-dependent zinc metalloprotease YME1L1 isoform 3 (6e-128) |
| Best NR hit (blastp) | PREDICTED: similar to GA17483-PA [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to GA17483-PA [Tribolium castaneum] (0.0) |
| GeneOntology terms | GO:0004176 ATP-dependent peptidase activity GO:0005743 mitochondrial inner membrane GO:0004222 metalloendopeptidase activity GO:0005524 ATP binding GO:0006508 proteolysis GO:0030163 protein catabolic process |
| InterPro families | IPR003960 ATPase, AAA-type, conserved site IPR005936 Peptidase M41, FtsH IPR000642 Peptidase M41 IPR003959 ATPase, AAA-type, core IPR003593 ATPase, AAA+ type, core |
| Orthology group | MCL13206 |
Nucleotide sequence:
ATGTTCTCATTGAACTCCATAAACACCCAGAACCAGATTCTAATAAGTTTTAGTCAACTA
TCGTCTCGATATTCCAACGCATTTAGAAATAGAAGGAGTAGCAATGTTAAGAACAAAGAT
TTAATAAGAAAAGAGGCCACAACAGCTCCTTACAACGCATCAATATGTCCAGAAAGTTTT
GATGAGGCCCTGCGTCATTTTGATAAGAATGTATTAACGGAGATGCGTAACATTGATCTG
AGATATGTGACATCTTTAGCCGGATCCTCTAGTAATATTATGAGAAATGTAGCCGGCTTA
GCATCGTCCAAAAAAGTATCATTCGTATCTACGGATTCGTTTGAGAAAAACAAAAATGGT
TGGGTCGCTACACCTACGATCACCGTAGACCTACGCCACAAAAATACTAAACTTAGTTTG
ACCGACAACTTTGTTGGTCTGCTGTCGAAGAGCATAAGGGATAATTGCTTTAATTATAAT
GTACAAGTAAGAGGTTTTAAGACAGAAAGAGGTATACATGCTGATCTGAAGAGAAACCCC
AATTTATTTAATAGACTACGTAAGTCTTTCGGTCTTCATGTATCCGACACGTCTGATAAC
AAATCCAACCTCGGTCCAGATGTTGCTCCACGATTGGAGAAGTTGCTCAGTGAAGACTCG
ACTAATCTTACACACCAACAGAAGGATAAGATTAAAATTGCCTTTGCCGAGGGATATTTG
GCAGGATCTCACCCTGACAATGCCCGAGGGACGAAGGCCTCTAAGTACTTAAAGCTAGTA
CAACAACTCCTCACTATAGTACTATTCCTGGCTATATTTGTCAGTCTGATGGCATCTGTT
AGCGGCACTGTTTTCCGGATCCAGTTGGGTAACCAGGTGGAGGTGGATCCTGAAGATATA
ACGGTCACCTTCGATGACGTCAAGGGTGCTGACGAAGCCAAGCAGGAGCTCAAGGATGTG
GTGGAGTTCCTGAAATCCCCGGAGAAGTTTTCATCTTTGGGGGGCAAATTGCCTAAGGGT
GTGTTACTGGTGGGTCCCCCTGGCACCGGGAAGACGTTATTGGCTCGAGCTGTGGCTGGT
GAGGCGAGGGTGCCGTTCTTCCACGCAGCCGGACCAGAGTTCGATGAGATCCTCGTGGGA
CAGGGCGCTAGGCGCGTCAGGGATCTATTTAAGGCGGCCAAGGAGCGAGCCCCCTGCGTC
ATATTCATTGACGAGATAGATTCAGTGGGTGCCAAACGTACCAACAGCGTGCTGCATCCG
TACGCCAACCAGACAATAAACCAACTCTTATCAGAGATGGATGGATTCCATCAGAACGAG
GGTGTGATAGTGCTGGGCGCCACCAACAGGAGAGACGACCTGGACCAGGCCCTGCTGAGA
CCTGGAAGATTCGATGTCGAAGTGTCCGTACCAACACCAGACTACGGTGGTCGTCTGGAG
ATACTGCGGATGTACGTGTCGAGGGTCGCGGCTGCCCCGGGGCTGGACGTGGAATCCCTA
GCCAGGGGTACCACGGGATTCACGGGCGCTGACCTCGAGAGTATGGTCAACCAGGCAGCA
CTCAAGGCAGCCATCGAGGGCGCCAAAACTGTGAGCATGTACCACCTGGAGGAGGCGAGG
GACAAGGTGCTCATGGGCCCGGCGAGAAGAGCGAGGCTACCCGACGACGAGGCCAACGCT
ATCACCGCCTGCCACGAGGGCGGGCATGCGGTGGTAGCGTACTACACTAAGGATTCTCAC
CCACTTCACAAGGTCACCATAATACCACGCGGACCTTCCCTGGGACACACAGCCTACATA
CCGGCCAAAGAAAGATATCACGTGACGAAACAACAACTCCTGGCTATGATGGACACCATG
ATGGGCGGGCGGGCGGCCGAGGAACTGGTCTACGGACCGGATAAGATTACATCGGTTTCT
TATCCCAGAATGAAGTACTTCTATATCCTATATCTATATTCCATAGAGTTTCCATGTGAG
CACATCATACTAGCTGTGGATGCTGAAATAAAGAAAATTCTATCAGAGAGCTACGAAAGA
GCTAAGGCCATACTGAGGACGCACGCTAAAGAACATAAGGCTCTGTCGGAAGCCTTATTA
AAATACGAGACTCTGGACGCTGACGACATCAAAGCGATCATGTCAGGAGACAAGGTGAAG
ATGGACCGAGGTAGAAGCAGCAACACTAATAAGGAGCCCTCGCCCGCCACGCTGCTGCCG
CACACGATGCCCGCTTAG
Protein sequence:
MFSLNSINTQNQILISFSQLSSRYSNAFRNRRSSNVKNKDLIRKEATTAPYNASICPESF
DEALRHFDKNVLTEMRNIDLRYVTSLAGSSSNIMRNVAGLASSKKVSFVSTDSFEKNKNG
WVATPTITVDLRHKNTKLSLTDNFVGLLSKSIRDNCFNYNVQVRGFKTERGIHADLKRNP
NLFNRLRKSFGLHVSDTSDNKSNLGPDVAPRLEKLLSEDSTNLTHQQKDKIKIAFAEGYL
AGSHPDNARGTKASKYLKLVQQLLTIVLFLAIFVSLMASVSGTVFRIQLGNQVEVDPEDI
TVTFDDVKGADEAKQELKDVVEFLKSPEKFSSLGGKLPKGVLLVGPPGTGKTLLARAVAG
EARVPFFHAAGPEFDEILVGQGARRVRDLFKAAKERAPCVIFIDEIDSVGAKRTNSVLHP
YANQTINQLLSEMDGFHQNEGVIVLGATNRRDDLDQALLRPGRFDVEVSVPTPDYGGRLE
ILRMYVSRVAAAPGLDVESLARGTTGFTGADLESMVNQAALKAAIEGAKTVSMYHLEEAR
DKVLMGPARRARLPDDEANAITACHEGGHAVVAYYTKDSHPLHKVTIIPRGPSLGHTAYI
PAKERYHVTKQQLLAMMDTMMGGRAAEELVYGPDKITSVSYPRMKYFYILYLYSIEFPCE
HIILAVDAEIKKILSESYERAKAILRTHAKEHKALSEALLKYETLDADDIKAIMSGDKVK
MDRGRSSNTNKEPSPATLLPHTMPA