| New model in OGS2.0 | DPOGS205263 |
|---|---|
| Genomic Position | scaffold606:- 48632-56035 |
| See gene structure | |
| CDS Length | 2496 |
| Paired RNAseq reads | 465 |
| Single RNAseq reads | 1197 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011063 (0.0) |
| Best Drosophila hit | RhoGAP54D, isoform A (1e-77) |
| Best Human hit | rho GTPase-activating protein 19 (3e-31) |
| Best NR hit (blastp) | rho GTPase activating protein [Culex quinquefasciatus] (3e-105) |
| Best NR hit (blastx) | rho GTPase activating protein [Culex quinquefasciatus] (7e-96) |
| GeneOntology terms | GO:0007165 signal transduction GO:0005622 intracellular |
| InterPro families | IPR000198 Rho GTPase-activating protein domain IPR008936 Rho GTPase activation protein |
| Orthology group | MCL14311 |
Nucleotide sequence:
ATGGGTTCTTCTGATATAAAACTTATAGAAAGGCTGAGAAACGAAAATTTGGAGCAGTTT
TTTACATTAGTGCGCATGCATTTATCTTTTGTAGTTGACATTAATACTGACGAGGTCGAT
TGTTCGGCGGATAAACCAAAGCAATTCAGGTGGAACTTTCACAAGAAAACTAAAACACAC
AGTTCTAATCTAGTATCTAGTCAAAATAATGTTCATAGTACAAAGAAAGCTGAAGAGGCT
AATTCTATCACAGAAGAGGGAATTTTGAGATTATATGAGTTGATAGAATTTCTTTCCCAA
CCTGACAATGTTACACAGGAGGGTATATTCCGTCGGACAGGTTCACTAAACCGTCAACAA
GAGTTACGCCAGCTCCTTGTCACCGGTTCGAGTCTCGGTTTAGATGACAGCAAGTTTTCT
GTTCATGATTGTGCATCTGTTCTCAAAGGATTCTTGGCTGAACTTCCCCAACCATTGCTT
ATGGATCAGTATTATCAAACCTACTGCACATTGGCCTCTCAATACCCGCCCAATGCTGAA
TCGTCAGAGGAGAAACTTTTAACTGCATTACAGTTATTATTATTGCTGCTGGCGCCATCT
CATAGGAACTTTCTAGAACGTCTACTCAGCCTGTTGCATTTAGTAGCTGATAATGAAGCA
AGTAATAGAATGTCGCCGGACACATTAGCCACAATGTTCACGCCACATTTATTGTGCCCA
AGAAAACTATCTCCGGAAACCTTCCACGCTGACTCCATAGCGCTATCTCCTCTAATAAGC
TTCATGATAAGGCAGTGCTCCCGTCTGTTCCTCGCTCCAAGCCGTTTAGCTACTGATGCG
GCCGCGTATTTCACTGTACGTGAACGGAAGCGAGCTATGTCTCCGGATGTAGACTTAGAT
GAGAGCATCACTGACAGAACAGCAGCGAACACAGTGTACACGTTCGTGGACAGGCATCGA
ACCCGCGCTGAGAACGAGATCAATCCCACAGACACCGCGCTCGCTCAGCTATATGCTCAC
ATACACTCGCTACCAGACTCACACCACAAGAGACGACTCGTCAAACATTTTAACAGGCAG
AATGGTTATGGGACACCTATACAAATTCAAAGGACAGGCAAAGTCGCGGGATCGAGGAGT
TTTGGGGATTCCATCAAACGTCATATATTCAACAAGGGCTTGCTGAACAAAACACCAAAG
AAAGGCTCTGGCTCGACAATTAACGTTATCGAAGAAAAATCTAGCAAATGTAAGAGATAT
ACGGATACTAAAAAAATCGATGTTTCCCACAAGAATATCGTATTAAAGAATTTGGCTAAC
AAAATAGCGAGTTCCGAATCGTTGGACGACGATTATGACTCGGACGCTAGCAATGAAAGT
ACGCTATCGGAGGGCGCGTTGAATAAATCTAGAAGACTGAGTCCGAAATTCGTTTCCGAA
CCTAATTTGAGCTCTATAGATTCTAACGAGGAAACGCCCAAGAATACAAAAACACGTTCG
AGATTATTCAGATCGAAAATTACTTCAAATACCAAAAAGTATCAAAAACGCTCAGCAATC
CGAAGCACGCCCACCTGCGTGTCTTGTGTCGAGGACGAGGATTCGGATGACGTCCAAGAG
AACAGTCTAGATGTAACGCCAAAGAAATCTAAGCTTAGTGCTGATGAATTAGAGTTCAAA
ATGCACTACCTAACGAGCACGCCGGGGATGTCGGAGGACATAGACGACGATTGCACCACG
CCATACACAGTCAATTTCAGGCGAGCCTCGATGTCACCCATAACTAAATCAACCCAAAAA
CTGTCCAAAGCTATGCAGGAATCCATAATGACACCTCGGTCGCGAAAACCTTTGATAATA
ACATCCGAACAAACAAACATACAAGAAGTGGGTAAATACGAATCGATGTCTCCCAAAAAC
GACAGCGACTTCGTATCCTCCGATGACGATAGGTCCACGTTTAGTTTTGAAAGGTCGAAT
CATTCAAGCGCGTCACAACAATCTAAAGCCATCGAGGCGCGCGGCGACTCATCGTCCGGC
GTGAGTCCATTGAGATCGGAGAACAGGCTTTTTATAAACAGCAACGAAAAAATAAACAAT
ACAACTCTATGTAACAGTGACACGCCATTCAAAGCGTCCTATGACATTAGTTACAAAACG
AAATCTCTCACGGAACCGTTCAAGGAATATTTGATAAGTAGATCGGTGCTAACGGCGAGT
CCGATCGATTTATCGATTATGAATAAATCGGATGCAGACGAGAAAATATCGGATTCGCTG
ATGTACTGTCTGGATGGTAACATACCATCCGATTTAACATCGTCTGTCAGCAACCTCGCT
GTTTCCAACGATACTCCGTTGAAATGTAATGTAAATATAGATTTAAGTCCAAACAAGAAG
ATGTGCGTCAAAATTTGTAATTCCATCGAAAAGAAAAAATCTATGGTGGGAAAGGAAAAT
ATTGAGCAGTACGAATTACGCGAAACGGATCTTTAG
Protein sequence:
MGSSDIKLIERLRNENLEQFFTLVRMHLSFVVDINTDEVDCSADKPKQFRWNFHKKTKTH
SSNLVSSQNNVHSTKKAEEANSITEEGILRLYELIEFLSQPDNVTQEGIFRRTGSLNRQQ
ELRQLLVTGSSLGLDDSKFSVHDCASVLKGFLAELPQPLLMDQYYQTYCTLASQYPPNAE
SSEEKLLTALQLLLLLLAPSHRNFLERLLSLLHLVADNEASNRMSPDTLATMFTPHLLCP
RKLSPETFHADSIALSPLISFMIRQCSRLFLAPSRLATDAAAYFTVRERKRAMSPDVDLD
ESITDRTAANTVYTFVDRHRTRAENEINPTDTALAQLYAHIHSLPDSHHKRRLVKHFNRQ
NGYGTPIQIQRTGKVAGSRSFGDSIKRHIFNKGLLNKTPKKGSGSTINVIEEKSSKCKRY
TDTKKIDVSHKNIVLKNLANKIASSESLDDDYDSDASNESTLSEGALNKSRRLSPKFVSE
PNLSSIDSNEETPKNTKTRSRLFRSKITSNTKKYQKRSAIRSTPTCVSCVEDEDSDDVQE
NSLDVTPKKSKLSADELEFKMHYLTSTPGMSEDIDDDCTTPYTVNFRRASMSPITKSTQK
LSKAMQESIMTPRSRKPLIITSEQTNIQEVGKYESMSPKNDSDFVSSDDDRSTFSFERSN
HSSASQQSKAIEARGDSSSGVSPLRSENRLFINSNEKINNTTLCNSDTPFKASYDISYKT
KSLTEPFKEYLISRSVLTASPIDLSIMNKSDADEKISDSLMYCLDGNIPSDLTSSVSNLA
VSNDTPLKCNVNIDLSPNKKMCVKICNSIEKKKSMVGKENIEQYELRETDL