| New model in OGS2.0 | DPOGS205304 |
|---|---|
| Genomic Position | scaffold606:+ 65378-68953 |
| See gene structure | |
| CDS Length | 2919 |
| Paired RNAseq reads | 1144 |
| Single RNAseq reads | 2781 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011044 (0.0) |
| Best Drosophila hit | Mms19 (4e-57) |
| Best Human hit | MMS19 nucleotide excision repair protein homolog (1e-68) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC011355 [Tribolium castaneum] (7e-111) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC011355 [Tribolium castaneum] (1e-102) |
| GeneOntology terms | GO:0005515 protein binding GO:0006289 nucleotide-excision repair GO:0003713 transcription coactivator activity GO:0045893 positive regulation of transcription, DNA-dependent GO:0030331 estrogen receptor binding GO:0045449 regulation of transcription GO:0000160 two-component signal transduction system (phosphorelay) GO:0030159 receptor signaling complex scaffold activity GO:0005634 nucleus GO:0006350 transcription GO:0005675 holo TFIIH complex GO:0030674 protein binding, bridging GO:0009725 response to hormone stimulus |
| InterPro families | IPR011989 Armadillo-like helical IPR016024 Armadillo-type fold |
| Orthology group | MCL15415 |
Nucleotide sequence:
ATGGAGGCTATTTGGTATAAATCGGAGCTAGCCGATGAAATAATTAAAAATAATGATATA
TTTAATCAAACCCAAAGCATAATAGCAGATGTCGTTTCTGGAAAATTTGATATCACTGTC
CTGGTAGAAAATATGGCTGGTGTGCTAACCAGCAAAGAAGTAGAAGACAGAGAACGAGGC
ATGAGGTTTTTCACAAAAATCTTAAAGGAAATTCCTGCTGATTATTTGACAGAGATGCAA
ATTAAATTCATATCAAAATTCTATGTAGATCGTCTTAAAGATAACCACAGAGTGATACCG
GCAGTTTTAGAAGGCTATTTGTCTGTTATTGATATGAAACATTATAACGTGCAAAGTAGT
GGTGAATATCTCACTGCTTTATTCCGGGAGGTGGCATGCCAGTCACAAGTAAGGCAAGAT
AGGTACAACATATACCTAACTATTCAAAAATTGTTTGCCAAGAATGTAGAATACATGAAA
ACATTAGGCCCGGATTTCGTATATGGATTCATATCGTCTATGGATGGAGAGAGGGATCCA
CGAAACTTGCTTTTCTTGTTTAATTTCTTACCGAACTTCCTAAGTAACATTCCATTGGGA
CATTTAGTTGAAGAAATGTTTGAAGTTATATCATGTTATTATCCCATCGACTTTCATCCG
TCTCCTGACGACCCAGCAGCTGTGTCGAGAAACGATCTAGCTGCTGTATTATGTCCTTGT
TTATGCGCGATTCCAGAGTTTGCTGAACATTGTCTTGTATTATTAATAGAGAAACTGGAT
TCTAACCTTCGAGTAGCTAAAATTGATTCTCTTATGCTATTGGCAGCTAGTTGCAAGACC
TTTAAATATGAAAGTTATGGACCATTTTTGAAAGCATTGTGGTCTTCACTTCAAAGAGAA
CTTACACATAAAACTGACGACGAGTTAAAGTTAGCTGCTCATGAAGCTCTATCAGCTTTA
GTATCAAAATTGTCCACAAAAGCAGAAACCGATCAATCATTCGAGAACTTCATTAAAGGA
ATACTTATATCCATGCAAAGTGCTATAGCCGAGTCTTCAACTGTTATCCAGTTTATGGAA
GCAGTGAAAATATTATTAACGGCCGCCAATGCTTCAAAACAATCATGTGTTCTGATAATA
AAAGCGATGATACCAGCCATTTTAGCATACTATGAATTCAAACCTTTGGTGAAATTACAA
ATTTCTTGTTTAGATGTTTTAGGTGATATGTATGAATTGGCTGATCATTGGGGGGTTTTG
GATGAAATGGAAAAAGAGGTAAATGAAATACCACAGTTATGCCTTACAGCTGTCAGTGAG
AGGGTGAAAGACTATCAAGTATCTGGCTTTAAAACTCTAATAAGAGTTAAAAATGTTCTT
CACATAGATTTGGTGCTACCATTTGTGGAAATTCTGATCTATAACATTCAACATTCTCAA
GATAGCGAAATATTGAGTGTTTGTGTTGAAACAGTACATGCTATAGCAAGGAAATATCCA
GAGCTTATAATGACTTTGGTCATAAAAGGGAAGTGTGACTTGGAAAACCTAACACAGGAC
AAAACAGCGCTACAAAAAAGACTAGATCTGCTCTCAAATCTTGCCAGTATAGATGATTTT
ACCAAAATTATTATAGAGGAAATGTTGAAAGTAATAACAACAAATGATGAGGAAGCTTCT
AAAGTTGTCAAAGCACTCAGTGGATCTATATCCAATGTAAGTTTGTATACAGAAGAAAAA
GTCGCACAGATAGAAAGTGATCATGGCCTTATAAGTTCCATTATGGCCTGGTTAACGAAA
TCAATTTTGGATGAATCTCATGAATCGTTGAATCACGGCTGTACATTGATATCGAACACA
ATATGCAGTTTGCCGCCTGAAAAGCAAGCTAATATTTTATCCAAACATTCAAAGGCTATT
TTAGAGAAGTGTGATTCAAATGAGATGTACTTCTTAATATTAGAATGTTTGTATCGTTCT
ATAAGTCCAACCATCTATGACACAAATTTCAAGGACATTATGGGTTTGGCCTTAAAACTA
GCTTTAAACTGTGAGAACCAGTTACTTAGAACGAAAGCTTGTTGTATGGTAGCCCATTTT
CTTAATAAGGCTCAGAGTGGTCCAAATTTTGAGATCTTAAATGAGGTTTTGAAATCTTAT
TTAACATCATGTAGCAGAGATAATGTTAATATATTACCAAGACTAATAGAATTGTATGGC
TGGATAACAAAGGCGCTTATTATGAGAGGCAATGACCTCTTCCAATTTTGGCTTTCCAAG
ATATTGATTTCTATTTCAACAAGCGAATGCAGTGTTGAGGCATCAGAAGCTATCAAAATA
ATAATGACGGATTCTGAGAATTGTCTTAACGCTAGACATCATTGTAGGACAAGTTTGTTA
TACAGGCAGAGGATGTTCCAGACATTCGTCAATTTGACTGAAAAACTTGGACCACCAAAT
TCTGATTCCGAAGAGGCCTTTTACTTAAGTTGGGGTTATGTTTTAGAGAAAACGCCGAAA
AGCATACTTAATAGTCAAATAAATAAGGTTACACCTTTGGTTATAGATGCTTTAGTGTAT
GACAATAAAGAATTGTTGAAGGTGATGTTAGAAGTCCTAATACATTTTGTGCAATCAAAA
AACATAACAGTGGGACACAGTTTACAAACAATTTTACCCAGGCTAATAAATTTAACTACA
TATGTTAAATGTATGGATGTCAGAATAAAAAGTCTGCAATGTCTGTACGAAATCGCAAAT
TCTTACCAGACAAGATTGCTTTTACCTCATAAGCAGGATATTTTAATCGATTTAGCGCCA
TCTCTTGACGATAAGAAGCGACTTGTGAGGAATATGGCGGTTAAGGCCCGAACAAGATGG
TACTTAGTTGGAGCTCCAGGCGAAAGTAAAGAAGATTAA
Protein sequence:
MEAIWYKSELADEIIKNNDIFNQTQSIIADVVSGKFDITVLVENMAGVLTSKEVEDRERG
MRFFTKILKEIPADYLTEMQIKFISKFYVDRLKDNHRVIPAVLEGYLSVIDMKHYNVQSS
GEYLTALFREVACQSQVRQDRYNIYLTIQKLFAKNVEYMKTLGPDFVYGFISSMDGERDP
RNLLFLFNFLPNFLSNIPLGHLVEEMFEVISCYYPIDFHPSPDDPAAVSRNDLAAVLCPC
LCAIPEFAEHCLVLLIEKLDSNLRVAKIDSLMLLAASCKTFKYESYGPFLKALWSSLQRE
LTHKTDDELKLAAHEALSALVSKLSTKAETDQSFENFIKGILISMQSAIAESSTVIQFME
AVKILLTAANASKQSCVLIIKAMIPAILAYYEFKPLVKLQISCLDVLGDMYELADHWGVL
DEMEKEVNEIPQLCLTAVSERVKDYQVSGFKTLIRVKNVLHIDLVLPFVEILIYNIQHSQ
DSEILSVCVETVHAIARKYPELIMTLVIKGKCDLENLTQDKTALQKRLDLLSNLASIDDF
TKIIIEEMLKVITTNDEEASKVVKALSGSISNVSLYTEEKVAQIESDHGLISSIMAWLTK
SILDESHESLNHGCTLISNTICSLPPEKQANILSKHSKAILEKCDSNEMYFLILECLYRS
ISPTIYDTNFKDIMGLALKLALNCENQLLRTKACCMVAHFLNKAQSGPNFEILNEVLKSY
LTSCSRDNVNILPRLIELYGWITKALIMRGNDLFQFWLSKILISISTSECSVEASEAIKI
IMTDSENCLNARHHCRTSLLYRQRMFQTFVNLTEKLGPPNSDSEEAFYLSWGYVLEKTPK
SILNSQINKVTPLVIDALVYDNKELLKVMLEVLIHFVQSKNITVGHSLQTILPRLINLTT
YVKCMDVRIKSLQCLYEIANSYQTRLLLPHKQDILIDLAPSLDDKKRLVRNMAVKARTRW
YLVGAPGESKED