| New model in OGS2.0 | DPOGS215918 |
|---|---|
| Genomic Position | scaffold6286:+ 1443-9491 |
| See gene structure | |
| CDS Length | 1443 |
| Paired RNAseq reads | 189 |
| Single RNAseq reads | 2310 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000289 (9e-12) |
| Best Drosophila hit | CG12360, isoform B (5e-42) |
| Best Human hit | traB domain-containing protein (2e-36) |
| Best NR hit (blastp) | PREDICTED: similar to GA11581-PA [Nasonia vitripennis] (1e-52) |
| Best NR hit (blastx) | PREDICTED: similar to GA11581-PA [Nasonia vitripennis] (1e-50) |
| GeneOntology terms | GO:0003674 molecular_function GO:0008150 biological_process GO:0005575 cellular_component |
| InterPro families | IPR011989 Armadillo-like helical IPR016024 Armadillo-type fold IPR002816 Pheromone shutdown-related, TraB |
| Orthology group | MCL39424 |
Nucleotide sequence:
ATGTCAGCTCACATCACTCGTGAGCTCGGTATGGCCCCCGGAGGTGAATTCAGACGAGCT
ATGGCTGAGGCCAAAAAGATACCTAACTGTGTTATCCAACTCGGTGATAGAGCCATCGAT
ATAACACTACACAGAGCTATATCCTCATTGACCTGGGGTCAGACAATACGGTTCATATGG
CACTTACTCACATCCAACCAGACTATCAGGATGACACATATGGCTATGATACTGTGGGTG
GTTCAAGTCATTCAAGATTTTTACAAACTTGGTGGTTTTGCAATCTTACCTATCTGTCTT
GGAAGTGAGAATGATAAAATCAGGTCTCGAGCTAGTTCAATACTAGCTGAGCTGTGTCAG
AACAATCCATTCTGTCAGGCTCGAGCATTGGAGTGTGGATTATTCAATGTGATGTTGCAC
TTAGCCCCGAGCGAGAAGGGAATGGCACTTGCTAAGTGTATATCGGCCATATCATCCATG
GCTCGTGACTTCAAGCCATCACTACAGGAGTTGACGGCACAGGGAGGTTGTGAATTGCTG
GCCAACACCCTTCAGGGTTCCGATATCTCAGCAAGGACTAGAGCTGCATTCCTGATAAGA
TACCTGTGTAACAGTTATGTGGATGCTAAAGTTCCTCGACTCATTGCTGCAAGAAATACG
AGCGACGCCGCCAGTCTACCATTACCACCTTCGGCTACATTTTTACAAAACGATGACAAT
GCTAAAGTTGTATTATTAGGTACCGTGCATTTTAGTAAAAAGTCTGTGGAGGACGTTTCT
GAGATTGTGAAAGTTCTCAAACCAAATGCGATTCTAATAGAGCTATGTCGTCAAAGAGTA
TCCCTCTTAGAATTGGATGACCGAAAGTTTTTAGAAGATGCTAAAAATTTAAATGCACAG
AAAATAAAAGACGCTGTTAAAGGGCAGAGCTTTATGTCTGGGATGCTTCACGCCATGTTA
TTAAAAACCTACGCTGATATCGCCAAAGAACTGGGGGTAGCTCCAGGAGGGGAATTCCGT
AGAGCATATCATGAGATGAAGAAAATCCCAGGATGCAAATTATTTCTTGGCGATCGGCCG
ATACGCATAACTATAGCTCGGGCGTTCCAATCCTTGACTGTCTTAGAGCTTGGACAAGTT
CTCTACCACCTGACCACATCAAATCCAAAGCCTTTAGACAAAGACCAATTAGAGAGATAT
AAAGATAAAGACTACGTACATGCTCAGTTTGAGGAAATAACAAGGCAAGTGCCCGCGTTC
AAAAAAGTGTTTCATGTTTTTGTCGACGAACGAGATAAATGCCTGGCATTTTCTTTGCAA
GAATGTGTTCGTAGTGTTGAAAAACCTCGTGTTTTGGGAGTTGTGGGTATGGGACATGTT
GACGGTATAATGAAATACTACGGTCAGATGAAGCAAGAAGATATTGTACCCCTACTATTG
TAA
Protein sequence:
MSAHITRELGMAPGGEFRRAMAEAKKIPNCVIQLGDRAIDITLHRAISSLTWGQTIRFIW
HLLTSNQTIRMTHMAMILWVVQVIQDFYKLGGFAILPICLGSENDKIRSRASSILAELCQ
NNPFCQARALECGLFNVMLHLAPSEKGMALAKCISAISSMARDFKPSLQELTAQGGCELL
ANTLQGSDISARTRAAFLIRYLCNSYVDAKVPRLIAARNTSDAASLPLPPSATFLQNDDN
AKVVLLGTVHFSKKSVEDVSEIVKVLKPNAILIELCRQRVSLLELDDRKFLEDAKNLNAQ
KIKDAVKGQSFMSGMLHAMLLKTYADIAKELGVAPGGEFRRAYHEMKKIPGCKLFLGDRP
IRITIARAFQSLTVLELGQVLYHLTTSNPKPLDKDQLERYKDKDYVHAQFEEITRQVPAF
KKVFHVFVDERDKCLAFSLQECVRSVEKPRVLGVVGMGHVDGIMKYYGQMKQEDIVPLLL