| New model in OGS2.0 | DPOGS208519 |
|---|---|
| Genomic Position | scaffold724:- 152127-154554 |
| See gene structure | |
| CDS Length | 747 |
| Paired RNAseq reads | 384 |
| Single RNAseq reads | 1061 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008370 (6e-75) |
| Best Drosophila hit | Usf (5e-12) |
| Best Human hit | upstream stimulatory factor 2 isoform 2 (3e-22) |
| Best NR hit (blastp) | PREDICTED: similar to USF [Tribolium castaneum] (3e-31) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC007937 [Tribolium castaneum] (7e-32) |
| GeneOntology terms | GO:0045449 regulation of transcription GO:0030528 transcription regulator activity GO:0005634 nucleus |
| InterPro families | IPR011598 Helix-loop-helix DNA-binding IPR001092 Helix-loop-helix DNA-binding domain |
| Orthology group | MCL16671 |
Nucleotide sequence:
ATGGCCAAAGTAGTAGTACTTGACGTCGATGAAAATTCTCTTGATAACAGCGCGGACAAC
GAATTACTAGGAATGGTAGATGAAGGATCTCTCGGAAGTGCAGATTGTGAGAGATCACAA
TTAGTGTCGCAATCGTTTCTGGAAAATAACGAAGAAAATAGTACGTCCTACAATTTTAAA
GATCTGTCTGGCACAGTGGCGTACAAACTTATACCGATGACAGGGAATCAAACTCCCAAC
AACATGGCTACCGAGTCTATAACATCTGGTGTACTACCCAGTGGAGAATTCTATGTGATT
GGTAATCCTGTACAAGTTTTTGGAACGGAGGCCGGACAAAAAAAAGTTGTTAGAAGGAAG
AGTGCTCTGCAGAATAAAGTTATCACCGCTAAGAAGCGTGATGACAAACGACGTGCTACT
CACAACGAAGTTGAAAGACGTCGACGTGATAAAATTAACAGTTGGATTACAAAGTTGGCA
GCATTGGTGCCAAACTCAGGTCTACAGGATACAGCCAGTAAGGGGGGAATATTGGCGAAG
GCGTGTGACCACATCACTGAACTCACAGAAAGACAGAAAAAATTAGAAAAACTAGAAGTG
GACAATGACAAACTAGTGTTAGAAGTCTTAAGATTGAATCAAGAGCTTGCCGATTTGAGA
AAGGAGAACGCTTCAATGAGAAGTCAGTTGGCCGACAACTGTATAGTTACAATGCAGAAC
AGACGAGCCCGAGGACAGAAATCTTAG
Protein sequence:
MAKVVVLDVDENSLDNSADNELLGMVDEGSLGSADCERSQLVSQSFLENNEENSTSYNFK
DLSGTVAYKLIPMTGNQTPNNMATESITSGVLPSGEFYVIGNPVQVFGTEAGQKKVVRRK
SALQNKVITAKKRDDKRRATHNEVERRRRDKINSWITKLAALVPNSGLQDTASKGGILAK
ACDHITELTERQKKLEKLEVDNDKLVLEVLRLNQELADLRKENASMRSQLADNCIVTMQN
RRARGQKS