New model in OGS2.0 | DPOGS207927  |
---|---|
Genomic Position | scaffold1828:- 12862-14260 |
See gene structure | |
CDS Length | 900 |
Paired RNAseq reads   | 144 |
Single RNAseq reads   | 462 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA000371 (2e-31) |
Best Drosophila hit   | Lcp65Af (5e-10) |
Best Human hit | ND |
Best NR hit (blastp)   | cuticular protein RR-1 motif 36 [Bombyx mori] (5e-34) |
Best NR hit (blastx)   | cuticular protein RR-1 motif 36 [Bombyx mori] (1e-32) |
GeneOntology terms    | GO:0008010 structural constituent of chitin-based larval cuticle GO:0005214 structural constituent of chitin-based cuticle |
InterPro families   | IPR000618 Insect cuticle protein |
Orthology group | MCL19515 |
Nucleotide sequence:
ATGGTTATTTCGAATTCGGTTTTAGCGATTGTGTTATTTAATATATTTTGTAGTGTGTTA
ACAGAAAATGTAGATGTGAGAAATCCAGTTCTCAAGGAACGATCGGTTAATAGAAATAAT
TATAGATACAATCACCCACCTTCATTTGAAAGCTATGAAGTGGTACCGGAAAATCAAAAT
GGTAAATTGGTAAAGTTGCGTGAAGAGAAGTCGATTAATTTCGACAATTCTGATATAAAA
GCTGTTCCCGTTACTGTCATATATGATGCTCCAATAGATAGCGCGCGTACTGAGGAGAAT
GAAAACAATAGTTCAACGTCTAAAGGGAGAAGGCGTAAGTTAAGAAGACGCCAGCAACTT
GTGAATAAAGGAGTCACAGAATCTGAGGTAAAACCAATTGATATTAAATATACAAAAAGA
AATGAAGAATCTGTGACGACAACAGAAAGAACTATTAGCACTCCTCCAGCTCGAAGCACA
ATAGTGCCAAAAACCTTTACTAAGAGACCTGCTGAATTTAACCCCATACCACAAAAACCC
CGAAGACAACGTGAACCTGTTGTAAAAATCGTAGATGAGAAAAATTACGTTTTTTCACAC
AGCGGCAGCTTTCACTACAGTTATGAGGGTGGCGATGGTACAAAAATTTCCAGCCAAGGG
GAATTAAGAAATTTTAGCAACGATGCTACGGGTGAAGCCGTCAGCGGAAGTGTATTCTAC
AAAGATAACGAAGGCAATGATGTTAGTCTGTCATACACAGCCGATGAAAACGGTTACCGG
CCATATGGCGCTCATCTGCCAACGCCTCCACCCATTCCAAGAGCAATTGCACGAGCTCTG
GCATATCTTGCTACAAAATCCACACCAGCACCAGTGACTGAGGCCATTGATTCGTTTTAA
Protein sequence:
MVISNSVLAIVLFNIFCSVLTENVDVRNPVLKERSVNRNNYRYNHPPSFESYEVVPENQN
GKLVKLREEKSINFDNSDIKAVPVTVIYDAPIDSARTEENENNSSTSKGRRRKLRRRQQL
VNKGVTESEVKPIDIKYTKRNEESVTTTERTISTPPARSTIVPKTFTKRPAEFNPIPQKP
RRQREPVVKIVDEKNYVFSHSGSFHYSYEGGDGTKISSQGELRNFSNDATGEAVSGSVFY
KDNEGNDVSLSYTADENGYRPYGAHLPTPPPIPRAIARALAYLATKSTPAPVTEAIDSF