| New model in OGS2.0 | DPOGS204620 |
|---|---|
| Genomic Position | scaffold827:+ 5492-11217 |
| See gene structure | |
| CDS Length | 1539 |
| Paired RNAseq reads | 155 |
| Single RNAseq reads | 584 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012178 (2e-103) |
| Best Drosophila hit | suppressor of fused (9e-61) |
| Best Human hit | suppressor of fused homolog isoform 1 (1e-69) |
| Best NR hit (blastp) | PREDICTED: similar to suppressor of fused [Tribolium castaneum] (5e-91) |
| Best NR hit (blastx) | PREDICTED: similar to suppressor of fused [Tribolium castaneum] (3e-81) |
| GeneOntology terms | GO:0000122 negative regulation of transcription from RNA polymerase II promoter GO:0001843 neural tube closure GO:0001947 heart looping GO:0003674 molecular_function GO:0005515 protein binding GO:0005575 cellular_component GO:0005634 nucleus GO:0005737 cytoplasm GO:0005929 cilium GO:0007368 determination of left/right symmetry GO:0008013 beta-catenin binding GO:0008134 transcription factor binding GO:0008150 biological_process GO:0010553 negative regulation of gene-specific transcription from RNA polymerase II promoter GO:0016566 specific transcriptional repressor activity GO:0021513 spinal cord dorsal/ventral patterning GO:0042802 identical protein binding GO:0042994 cytoplasmic sequestering of transcription factor GO:0043588 skin development GO:0045879 negative regulation of smoothened signaling pathway GO:0005730 nucleolus |
| InterPro families | IPR020941 Suppressor of fused domain IPR007768 Suppressor of fused-like |
| Orthology group | MCL14763 |
Nucleotide sequence:
ATGTCCGGACCGAGTTCTAATGCGATGCCGGCTGGTGTTGTTAGGAATAGTGCGTTGTCA
TTCGTTGCGTCTGCGCAGGCCACAGACGGATCAGACGTAGCAGTTCCGGTCAACCCAGCT
GCTTTGGCTGTAGAGGGAGAACAGATGACTCAAACAGAGCGTTTGATGCCTCCAGGCCTG
ACTCCTCTTTATGAAGCCTGTACCAAAGTGTACCCTGACCAGCCCAACCCACTTCAAGTG
ACCACAAGACTTAAATATTGGTTGGGAGGCCAGGATCCTCTTGACTACATCAGCATGTAC
TGGAACCCCGGGAGACCTGATGAGAACATACCACCACATTGGCATTATGTTAGCTTCGGT
CTATCAGACCTTCACGGTGATGGCCGAGTTCATCCAGAGCCACACGGTTGTTCTGGTTAC
GGCCTAGAGCTGACCTTTCGTCTGGCCAGTGAGGACAAGCAGCCTCCACTCTGGCCCGCC
GCTCTCCTACAGGCTCTTGCTAGATATATATTTACTACCGGTAATAAGTTCGTGTGTGGC
GACCACGTGTCCTGGCACGCGCCTCTGGACGGCTCCTCCTCGAGGGTCCGTCACCTGTTA
GTAGCGACCGACCCTCAGTTAGAGACCACCAACACATGCCACGGCAGCGTCACGTTCTTA
CAGGTGGCAAACGAGCAGACAGGCTACTTGGTGGGGAGTAGCTACCGTCCCCCGTCGTTG
GGAAGTGTGGGCATAAGGAAATGTCAGGAAAAGATGGTGGGTTGCACTAGTCGTGAGCTG
CGAGCGGCGCAGAGAGGTTCAGGGTTTGAAGTGCTGAACATGATCAGTGAAGATCCGAGG
TGTGGAGGCGCTTGGCTGGTGACTCGCACCCAGAGACGCGTCTCAGCTCGCATCCAGCAC
CAGAACGTGCAGAAGCCAGCTCACCTGGCCGGAGTGTCCGCTAGGGTCGCCTGGAGGGAA
TACAGCGTTAGTCATAAGATGTCCACCGATAGTTTCAAGATGTCTTCCATAGAGAGAGCT
CTGCCACAGTTACCGGAAATGATGCAGTGGGAGGGTTCCAGTACACGGCTAACTAGTTCG
CCCACTCGCCACGAGATGGCGCTGCCGCTGAACGTCGAGAAGGGTTCCTGGCGCGGAGAC
GAAGTGGAGTATCTGAATGGAGTCCACTTACTCCTGAACGCGGAAGCCGCCAGCCTGCTA
CCGCTAGCTATAGACGGTCGAGTGCTCCACGATCGTCACTTCACGTGGCGTCAGGGTCCC
CGGACGGTGACGCTCCTGACCCCCGCCGTTGGAGGAGCCTTCGTTACCAGGGCGAAGCCC
TACGCCTCCAAAGGACCTTGGCTGCAGATCCTGATTCCACCGGAGCTGGCTGGTGATATG
TCCAAGCAAGTGTCCGGCCTGGCCAGGCTGTCAGACAGTGACTCGGAGAGTGACGAGGAC
AGTACGGAGACCTCACCCAGACCGAGCATACCTATAACACTCACATGGCCTCACTATAGA
CTGAGCATCTCTGTACTACATGACCTAGAAATATTATAA
Protein sequence:
MSGPSSNAMPAGVVRNSALSFVASAQATDGSDVAVPVNPAALAVEGEQMTQTERLMPPGL
TPLYEACTKVYPDQPNPLQVTTRLKYWLGGQDPLDYISMYWNPGRPDENIPPHWHYVSFG
LSDLHGDGRVHPEPHGCSGYGLELTFRLASEDKQPPLWPAALLQALARYIFTTGNKFVCG
DHVSWHAPLDGSSSRVRHLLVATDPQLETTNTCHGSVTFLQVANEQTGYLVGSSYRPPSL
GSVGIRKCQEKMVGCTSRELRAAQRGSGFEVLNMISEDPRCGGAWLVTRTQRRVSARIQH
QNVQKPAHLAGVSARVAWREYSVSHKMSTDSFKMSSIERALPQLPEMMQWEGSSTRLTSS
PTRHEMALPLNVEKGSWRGDEVEYLNGVHLLLNAEAASLLPLAIDGRVLHDRHFTWRQGP
RTVTLLTPAVGGAFVTRAKPYASKGPWLQILIPPELAGDMSKQVSGLARLSDSDSESDED
STETSPRPSIPITLTWPHYRLSISVLHDLEIL