| New model in OGS2.0 | DPOGS200030 |
|---|---|
| Genomic Position | scaffold6359:- 13485-16139 |
| See gene structure | |
| CDS Length | 1266 |
| Paired RNAseq reads | 25 |
| Single RNAseq reads | 63 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012422 (0.0) |
| Best Drosophila hit | nicotinic acetylcholine receptor alpha 96Ab, isoform B (0.0) |
| Best Human hit | neuronal acetylcholine receptor subunit alpha-3 isoform 1 (3e-80) |
| Best NR hit (blastp) | nicotinic acetylcholine receptor alpha-2 subunit [Heliothis virescens] (0.0) |
| Best NR hit (blastx) | nicotinic acetylcholine receptor subunit alpha 2 [Bombyx mori] (0.0) |
| GeneOntology terms | GO:0004889 nicotinic acetylcholine-activated cation-selective channel activity GO:0005892 nicotinic acetylcholine-gated receptor-channel complex GO:0005887 integral to plasma membrane GO:0045211 postsynaptic membrane GO:0006811 ion transport |
| InterPro families | IPR006029 Neurotransmitter-gated ion-channel transmembrane domain IPR006202 Neurotransmitter-gated ion-channel ligand-binding IPR018000 Neurotransmitter-gated ion-channel, conserved site IPR006201 Neurotransmitter-gated ion-channel |
| Orthology group | MCL14157 |
Nucleotide sequence:
ATGACGAAAGCGGTTCTTCATCACACTGGTAAAGTACTTTGGACACCACCAGCCATCTTC
AAATCGTCCTGCGAAATAGATGTCCGTTATTTTCCATTCGATCAACAAACTTGTTTTCTT
AAATTCGGTTCTTGGAGTTACGATGGAGATCAGATTGATTTGAAACACATTAACCAAAAA
AAGGGTGATATGGTGGAGGTGGGCATTGACCTCAGAGAATACTATCCTTCCGTGGAATGG
GACATCCTTGGAGTACCAGCTGAAAGGCACGAACGTTATTATCCATGCTGCCAAGAACCT
TACCCTGATATTTTCTTCAATATAACTCTAAGAAGGAAAACGTTATTCTACACCGTCAAT
CTTATAGTACCATGTGTTGGAATATCGTATCTGTCCGTCCTTGTTTTTTATTTGCCAGCT
GATTCTGGAGAAAAAATCGCTTTAAGTATATCAATACTTCTCTCTCAAACTATGTTCTTC
CTTTTAATATCTGAGATTATTCCATCAACATCCCTCGCCCTGCCTCTACTTGGGAAGTAT
CTTTTATTCACTATGTTGTTGGTGGGGCTCTCTGTAGTTATAACCATTATAATATTAAAC
GTTCATTACCGAAAACCTAGCACCCATAAGATGCAACCTTGGGTAAGAAAGTTTTTTATA
ACGAAGTTGCCAAAGTTACTTTTGATGAGAGTACCGAAGGATTTGCTTAGAGATTTGGCT
GCGCAAAAAATAGCTGGGAGAAGCATGAAGAACAAGTTTAAAGATGCTCTAGCTGCAGCT
GAACAGAACAATTCTAATGCCTCAAGTCCTGACTCCTTACGCCATCATCTCCCAGGAGGT
TGCAATGGACTACATACAACAACCGCTACTAATAGATTTAGTGGTCTTGTTGGCGCGCTC
GGTAACCTTGGAGCAGGGTACAATGGCTTGCCGTCTGTTATGTCCGGACTTGACGACTCA
CTGAGCGATGTGACCCCAAAAAAGAAGTACCCTTTCGAATTGGAGAAAGCCATCCACAAC
GTTATGTTTATTCAACATCACATGCAACGCCAGGACGAATTCAATGCGGAAGATCAAGAC
TGGGGTTTTGTTGCTATGGTACTTGATAGATTGTTCCTCTGGATTTTTACCATTGCTTCC
ATAGTTGGTACATTTGCTATTTTATGTGAAGCACCTTCCTTGTACGATGATACGAAGCCC
ATAGATATGGTGCTGTCATCTGTGGCGCAGCAACAATTTTTGCCTGTGGACAGCGGGGAT
TCCTAA
Protein sequence:
MTKAVLHHTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFLKFGSWSYDGDQIDLKHINQK
KGDMVEVGIDLREYYPSVEWDILGVPAERHERYYPCCQEPYPDIFFNITLRRKTLFYTVN
LIVPCVGISYLSVLVFYLPADSGEKIALSISILLSQTMFFLLISEIIPSTSLALPLLGKY
LLFTMLLVGLSVVITIIILNVHYRKPSTHKMQPWVRKFFITKLPKLLLMRVPKDLLRDLA
AQKIAGRSMKNKFKDALAAAEQNNSNASSPDSLRHHLPGGCNGLHTTTATNRFSGLVGAL
GNLGAGYNGLPSVMSGLDDSLSDVTPKKKYPFELEKAIHNVMFIQHHMQRQDEFNAEDQD
WGFVAMVLDRLFLWIFTIASIVGTFAILCEAPSLYDDTKPIDMVLSSVAQQQFLPVDSGD
S