| New model in OGS2.0 | DPOGS208516 |
|---|---|
| Genomic Position | scaffold9861:+ 307-4129 |
| See gene structure | |
| CDS Length | 1788 |
| Paired RNAseq reads | 985 |
| Single RNAseq reads | 2277 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008452 (0.0) |
| Best Drosophila hit | CG1582 (0.0) |
| Best Human hit | putative ATP-dependent RNA helicase DHX57 (1e-162) |
| Best NR hit (blastp) | PREDICTED: similar to ATP-dependent RNA helicase [Nasonia vitripennis] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to ATP-dependent RNA helicase [Nasonia vitripennis] (0.0) |
| GeneOntology terms | GO:0008026 ATP-dependent helicase activity GO:0004386 helicase activity GO:0003676 nucleic acid binding GO:0008270 zinc ion binding GO:0005524 ATP binding |
| InterPro families | IPR001650 Helicase, C-terminal IPR007502 Helicase-associated domain IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal IPR014001 DEAD-like helicase |
| Orthology group | MCL10204 |
Nucleotide sequence:
ATACGTTTAGAAAATAAGATCTCGTCGAAAACCCGTCTAACGTTCTGCACTACCGGTATA
TTGCTGAGGCGACTGGAATACGATCCGCAGTTGAAATCGATCACCCACATCATAGTTGAC
GAGGTTCATGAGAGGTCCGAAGAGAGCGATTTCCTCTTGCTAATATTGAGGGACCTTATC
AAAGTTAGAAAGGACTTGAGGGTCATATTGATGAGTGCGACTCTGAATGCGGAGCTGTTC
TCGGATTATTTTGACAAGGTTCCAGTCTTGGAGATTCCTGGCAGAACTTTTCCGGTGGAA
CAATACTTTTTGGACGACATTTTGGATATGACAGATTATATAATGGAGGAGAACGGACCT
TTTGCTCGTAAAATTAAGAAAGGTGACAAGGACAAAAAGTTTGATTTCGAAACCGAGTTA
GAAGCCTGCGATGTCAAGTCAGAATCCACTGAGCCGCCGAAGATAGTGATTCGGGACGAA
AATCTAACGATATCACAAATCGTTGCGAGATATCCCAAACTTAGTAAGAAAGCCTGCAAA
AACCTATACCTCATGGATACTGAAAAGATAAATTTGGAACTCATAGAGCATGTTCTGACA
TACATCGTATCTGGACACCATTCGTGGCCGACAGAGGGCGCTATTTTAATATTTCTGCCT
GGTATAGGCGAAATAATGTCGTTATACGATCAGTTGATTGACAGTCATACGTTCAGCCCG
AAAACGGGCAAATACAAAATAATTCCCCTCCACTCGACCTTAACGAGCGAGGAGCAGGCC
ATGGTGTTCCAGAAGCCGAGAGATGGCGCTAGGAAGATAGTTCTCTCAACTAACATAGCG
GAGACATCCGTGACCATAGACGACTGTGTCTTTGTTGTCGACTGTGGAAGAATGAAAGAG
AAACGCTTCGATTCCAATCGCAATATGGAATCTCTGGATCTGGTGTGGGTGTCTAGAGCC
AACGCCAAGCAGCGGAAAGGTCGCGCCGGTCGGGTGATGGCCGGAGTTTGTATCCACCTG
TTCACATCGCACAGATATAATTACCATCTCTCAGAACAGCCCGTCCCGGAGATACATAGA
GTGCCGCTGGAACAGCTGGTGCTGAAGCTGAAGATATTACCGCTGTTCCGGAACATGGGC
GTGCATGAGGTGCTCGGTAAAACAATCGAACCCCCTTTGAAATCTAACATAGATGGTGCG
CTAATAAGATTGCAAGATGTTGGGGCGCTGGACAAAATGTATGCTCTAACGGCTCTTGGC
AAGCACCTGGCTGCCCTGCCAGTGGATGTCAGGATTGGGAAACTCATGTTATTTGGAGCT
ATATTCTGCTGTGTCGATTCAGCTTTGACGATGGCAGCATTTTTGAGTCACAAAAGCCCA
TTCCTGGCGCCGTTTGGTAAAAAATCGGAGGCTGATGCAAAGAGGAGAGAATTCGCGTGT
TCTAACAGCGATCAGCTGACGACGTTGAGGGCTTATAGAAAATGGCAACAAGCGCTGAAA
CAAAGCACACACTCAGCTCTGGTATTCGCTAACGAGAACTTTTTGTCGCACAAGACGCTT
GTAATGTTAGCTGATATCAAGCATCAGTTGCTTGGTCTTCTCGCGTCGATAGGCTTCGTA
CCAGACATGCCGGGCTTGAGGAAGAAGATGTATAAGGATTCCGTCCAAGCTCTCACAGGT
GAAGAGCTAAACTGTAATGGAACGAATGATAAACTTCTGGCCGCTATACTGTGTGCTGCG
TTGTATCCTAACGTTGTGAAGGTAAATAAAAAAGATAATTATATATAG
Protein sequence:
IRLENKISSKTRLTFCTTGILLRRLEYDPQLKSITHIIVDEVHERSEESDFLLLILRDLI
KVRKDLRVILMSATLNAELFSDYFDKVPVLEIPGRTFPVEQYFLDDILDMTDYIMEENGP
FARKIKKGDKDKKFDFETELEACDVKSESTEPPKIVIRDENLTISQIVARYPKLSKKACK
NLYLMDTEKINLELIEHVLTYIVSGHHSWPTEGAILIFLPGIGEIMSLYDQLIDSHTFSP
KTGKYKIIPLHSTLTSEEQAMVFQKPRDGARKIVLSTNIAETSVTIDDCVFVVDCGRMKE
KRFDSNRNMESLDLVWVSRANAKQRKGRAGRVMAGVCIHLFTSHRYNYHLSEQPVPEIHR
VPLEQLVLKLKILPLFRNMGVHEVLGKTIEPPLKSNIDGALIRLQDVGALDKMYALTALG
KHLAALPVDVRIGKLMLFGAIFCCVDSALTMAAFLSHKSPFLAPFGKKSEADAKRREFAC
SNSDQLTTLRAYRKWQQALKQSTHSALVFANENFLSHKTLVMLADIKHQLLGLLASIGFV
PDMPGLRKKMYKDSVQALTGEELNCNGTNDKLLAAILCAALYPNVVKVNKKDNYI