| New model in OGS2.0 | DPOGS213745 |
|---|---|
| Genomic Position | scaffold715:+ 11530-16140 |
| See gene structure | |
| CDS Length | 1587 |
| Paired RNAseq reads | 1403 |
| Single RNAseq reads | 3725 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009275 (3e-128) |
| Best Drosophila hit | trp-like, isoform B (1e-72) |
| Best Human hit | short transient receptor potential channel 5 (5e-29) |
| Best NR hit (blastp) | PREDICTED: similar to calmodulin-binding protein trpl [Tribolium castaneum] (2e-116) |
| Best NR hit (blastx) | PREDICTED: similar to calmodulin-binding protein trpl [Tribolium castaneum] (9e-97) |
| GeneOntology terms | GO:0005516 calmodulin binding GO:0005886 plasma membrane GO:0016028 rhabdomere GO:0009416 response to light stimulus GO:0019722 calcium-mediated signaling GO:0008086 light-activated voltage-gated calcium channel activity GO:0005887 integral to plasma membrane GO:0005262 calcium channel activity GO:0006816 calcium ion transport GO:0009628 response to abiotic stimulus GO:0005515 protein binding GO:0016027 inaD signaling complex GO:0005261 cation channel activity GO:0015279 store-operated calcium channel activity GO:0055085 transmembrane transport GO:0016021 integral to membrane GO:0007589 body fluid secretion |
| InterPro families | IPR002153 Transient receptor potential channel, canonical |
| Orthology group | MCL23996 |
Nucleotide sequence:
ATGGTTGGGTTGGAGAACTTTGAACTGACTGGCATTAAAAGTTACACCCGCTTTTGGGGC
CTGCTGATGTTTGGATCATACTCCGTGATAAATGTGATCGTTCTGTTGAACCTTCTCATT
GCCATGATGTCCAACTCTTACGCCATGATCACTGAACATTCAGATGTCGAGTGGAAATTT
GCCAGAACACGTCTATGGATGAGCTACTTTGAAGAGGGAGCAACTTTGCCGCCTCCATTC
AACATATTTCCCACTCCTAAACTAGTTATGAAGTTGTTAGGACTTAGAAAGAAAGAAAAT
GACGAATCATTCAAGGCTCAGAAAGAGAAAGACGATGTGCATTACACGGCGGTGATGCGC
GCTTTGGTCTGGCGCTATGTGTCTGCGATGCATAGACGTCTTGACGAGGATCCAGTTACT
GAAGACGATATAAATGAGCTTAAAGGAGACGTCTCCGCGCTCAGATATGAACTGTTAGAG
GTGTTCGAAAAGAATGGCATGGATGTGTCATTTACAGATCGCAAGGAGAAGATGGTACTC
GCAAAACGGATGAAGGTTTGGGAACGGAGACTTATGAAGGACTTCCAAGTGACGCCAGTG
TCAGTTGAAGAAGACGGTAAACCAGTGCATGAAGACAGTCTGGCGAGATTCCGAAGAGTA
GCCCGCATGGCTGCCGCTGCTGCAAGGGGCTCCAAATGGGACCAAACCCTGGCTGCTACT
GGGATATCATCTCAAATCGGTCGCTGCCGAACACGACAGTCTTTCAAAAAGCAGCAGAAT
TTGCAGCGCGCCATTGACGAGGCCAAAAAGCTGGTTTCCCGATCACCTGTTCACGGATCT
CGTCCATTGACACCATTGGAAATGCCGGAAACTCCTGGTCATACTATATTGGAGCTCATA
AAGGACATTTCCACGGAGATAGAGGAACAAAACTACTCCAGTGCTCGTTTGCCACGGACC
AAGTCTCCGAGGAGAAACGATGCGGGAGTCAATGGAGTTCCACCAGCGAGATTCCTAAGT
CCTAACGACGCCCGCAGTCGCGCTACGTCCCCCATACCGCGAGGGCCAAGCCCTACCAGG
TTGTCTACCGCTCAGCCTCGAAGCCTCAGTCCTGACCCGAGGCCTTCCAGTCCAACCGGA
AGTGAAAGACCAGAACCGAGTCCATTAAAAGCTCAACGTCTACCGGGTTCTTCGCCGCCA
AAAGTTGTAAAAAAGAAGTCTCCATTACCGCCCTCTGGAGAATCCACAGAACACAGACAT
CACAGCAGTGTAGAAGTTATAGCGTTAGCGAGACCAGTTGCTCCTGATATCAAACCAGTC
AAGGATGGCCTTCCACCCCCTCCCGCCTACTCCAAATCTAAGCCATCTACAGATAGTTCA
TCCAAACAGCCGGTGCCGATGCCAAGATCACGTTCGCCCTCTCCAAAGCCCGCAGCAAAA
ACTAACACCAGCGCAAACACATCTCATCTTCTGTCCTCTTCTAGCACGGAGTTACTGATA
CCTCCCTCCCCCCGCGTCTTACCCCCTGGACGTCGAATAGAAGATGTCAACACAATTAAA
CGTCAGCCGACCACTGGCTGGATATAA
Protein sequence:
MVGLENFELTGIKSYTRFWGLLMFGSYSVINVIVLLNLLIAMMSNSYAMITEHSDVEWKF
ARTRLWMSYFEEGATLPPPFNIFPTPKLVMKLLGLRKKENDESFKAQKEKDDVHYTAVMR
ALVWRYVSAMHRRLDEDPVTEDDINELKGDVSALRYELLEVFEKNGMDVSFTDRKEKMVL
AKRMKVWERRLMKDFQVTPVSVEEDGKPVHEDSLARFRRVARMAAAAARGSKWDQTLAAT
GISSQIGRCRTRQSFKKQQNLQRAIDEAKKLVSRSPVHGSRPLTPLEMPETPGHTILELI
KDISTEIEEQNYSSARLPRTKSPRRNDAGVNGVPPARFLSPNDARSRATSPIPRGPSPTR
LSTAQPRSLSPDPRPSSPTGSERPEPSPLKAQRLPGSSPPKVVKKKSPLPPSGESTEHRH
HSSVEVIALARPVAPDIKPVKDGLPPPPAYSKSKPSTDSSSKQPVPMPRSRSPSPKPAAK
TNTSANTSHLLSSSSTELLIPPSPRVLPPGRRIEDVNTIKRQPTTGWI