New model in OGS2.0 | DPOGS200315  |
---|---|
Genomic Position | scaffold304:- 61242-62420 |
See gene structure | |
CDS Length | 504 |
Paired RNAseq reads   | 8 |
Single RNAseq reads   | 28 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA005612 (1e-43) |
Best Drosophila hit   | globin 1, isoform A (3e-11) |
Best Human hit | cytoglobin (4e-12) |
Best NR hit (blastp)   | globin [Samia cynthia ricini] (2e-50) |
Best NR hit (blastx)   | globin [Samia cynthia ricini] (1e-48) |
GeneOntology terms    | GO:0019825 oxygen binding GO:0020037 heme binding GO:0005506 iron ion binding GO:0015671 oxygen transport GO:0005737 cytoplasm GO:0046872 metal ion binding GO:0006810 transport GO:0005344 oxygen transporter activity |
InterPro families    | IPR009050 Globin-like IPR002336 Erythrocruorin IPR012292 Globin IPR000971 Globin, subset |
Orthology group | MCL11150 |
Nucleotide sequence:
ATGGGTGGGATCGTGAGTCGGATCTGGTGGGGTGGCGTTCCGGATGCCGTACAGGCGTAC
TCTGGCTTATCTCACCGAGATATATACACAGTGCAGAAGACTTGGGCGGTAGTATATTGC
AATGCAGCTGAGAACGGCATTGAAATATTCAAAAGGCTATTTCATGCGAATCCAGAAACG
AAAAATTTTTTTATAAACTTTCGGAACCTTAGCGATGAAGAGTTGGATAAGAGTCACCAA
TTCAGGGCTCACGTCATCAATTTGATGTCGTCTTTGAACCTGGCGATCACCAATCTTCAC
CAGCCGGAGGTGACCGCCGCGCTGATGAACAAGCTGGGAGAATCCCATGGAAAGAGAGGC
ATACGAGAGGAACACTTACTTAGCCTCAAAGATGTGATGCTGGAGATGCTCAATAGCCTT
CTAGGGCTTGACGAGTCGGCACTTGTGTCTTGGAATAAGACAATAGATTTTATATACAAA
CATATATTTCAAACTTTACATTGA
Protein sequence:
MGGIVSRIWWGGVPDAVQAYSGLSHRDIYTVQKTWAVVYCNAAENGIEIFKRLFHANPET
KNFFINFRNLSDEELDKSHQFRAHVINLMSSLNLAITNLHQPEVTAALMNKLGESHGKRG
IREEHLLSLKDVMLEMLNSLLGLDESALVSWNKTIDFIYKHIFQTLH