| New model in OGS2.0 | DPOGS200316 |
|---|---|
| Genomic Position | scaffold304:- 51597-53378 |
| See gene structure | |
| CDS Length | 606 |
| Paired RNAseq reads | 724 |
| Single RNAseq reads | 1743 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005612 (2e-68) |
| Best Drosophila hit | ND |
| Best Human hit | cytoglobin (4e-10) |
| Best NR hit (blastp) | globin [Samia cynthia ricini] (1e-73) |
| Best NR hit (blastx) | globin [Samia cynthia ricini] (7e-72) |
| GeneOntology terms | GO:0043005 neuron projection GO:0005737 cytoplasm GO:0005344 oxygen transporter activity GO:0046872 metal ion binding GO:0015671 oxygen transport GO:0006810 transport GO:0005506 iron ion binding GO:0019825 oxygen binding GO:0020037 heme binding GO:0004601 peroxidase activity GO:0006979 response to oxidative stress GO:0008152 metabolic process GO:0043025 neuronal cell body |
| InterPro families | IPR009050 Globin-like IPR012292 Globin IPR000971 Globin, subset |
| Orthology group | MCL11150 |
Nucleotide sequence:
ATGCTCTACTACTATCTTTGTTCTACATTTGTCTTGCTGTCAGCTTACGTTGTGTTGAAG
AGGGTTAAATTTGGACATAAGATTGAAATGGGTAGTTGGCTGACATACCTCTGGTGGGGT
GGAGACCCAGATCTGGTAAATCCTTTATCAGGTCTGACGAAGCGTGAGGTGTACGCCATC
CAGCAGTCGTGGGCTCCAGTCTATAGCAACTCTGTAGCCAATGGAACTGAACTCCTCAAA
CGGTTATTCCGAGCATACCCAGAAACTAAGGAGTTTTTCAAAATGGTGAGGAAATCTTCT
GAAGACGAATTCATAGGAAATCCACAATTCAGAGCGCACGTGATAAATTTAATGAGTTCA
TTGAACCTGGCTGTTGGCAATCTCAATCAGCCCGAAGTCGTTTCGGCCATGATGAACAAA
CTGGGAGAGTCACATGGCAGAAGAAAAATACAGGAAAAACACTTTCATGACTTGAAGGAC
GTTATAGTCAAAATGTTTATAGAAGTATTGAAACTGGATGGCACTACACTGAATGCGTGG
GGAAAAGCTGTTGATTTCTGGTACAAACACATCTTCGAAACGTTGAAACAAGCCGAGATA
AGATAA
Protein sequence:
MLYYYLCSTFVLLSAYVVLKRVKFGHKIEMGSWLTYLWWGGDPDLVNPLSGLTKREVYAI
QQSWAPVYSNSVANGTELLKRLFRAYPETKEFFKMVRKSSEDEFIGNPQFRAHVINLMSS
LNLAVGNLNQPEVVSAMMNKLGESHGRRKIQEKHFHDLKDVIVKMFIEVLKLDGTTLNAW
GKAVDFWYKHIFETLKQAEIR