| New model in OGS2.0 | DPOGS200310 |
|---|---|
| Genomic Position | scaffold304:+ 4420-9838 |
| See gene structure | |
| CDS Length | 1074 |
| Paired RNAseq reads | 960 |
| Single RNAseq reads | 2978 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005587 (3e-128) |
| Best Drosophila hit | CG10254, isoform A (8e-37) |
| Best Human hit | E3 ubiquitin-protein ligase UBR4 (6e-22) |
| Best NR hit (blastp) | ubiquitin-conjugating enzyme E2-230k, putative [Pediculus humanus corporis] (1e-71) |
| Best NR hit (blastx) | ubiquitin-conjugating enzyme E2-230k, putative [Pediculus humanus corporis] (4e-69) |
| GeneOntology terms | GO:0004842 ubiquitin-protein ligase activity GO:0051246 regulation of protein metabolic process GO:0043687 post-translational protein modification |
| InterPro families | ND |
| Orthology group | MCL31070 |
Nucleotide sequence:
ATGGCGGGTCAAAATCCAGGTTCGCCTACCGATTTTCAATATTTTTACGAGGATGAAGTG
TACAAAATCAATAACCGTGGCCAAGTCGTCTTCGGTCTGGTGTTGGAGAATTATGAAGCA
AACTCAAGCGACCAAGAGAGCGACATCGAAACACCCATACAAAAAGGCGAAATTCGTGTT
GTCTGGCACCCTTCGGGTACCGAACGTGTTATTTCGGAAAAATCGGTTGGTTTAGCCGAT
CGCTCGTTGATGCCAGGAGATGTTGTCCGTCGCCTTATAGCCGGGCGGGACACCCAGCGG
GGTTATTGCAGGGATATAGTGATGACAGCGGCGCTCCAGATAGTCGGCACCAAGCACGTC
ATACCCAACGTGGCCAGCGAGAGGCTCCAGCCTTTGGAGGAATTCACTCCAGACCTGGCT
GTCTGTCTTGATTCCTGGGTCGGATCGTCAAAGTCGGTTCACAGTAAACTGCGTCTAGTG
TCATCGGATGGGTCTCGGTTGGAATATCCAGATCTGGACACGTGTCCATTGGAGGACTAC
TCGATGAGACGTCGACGTGCAACGCCGTACTCCTCGTCGGAGTTTTACCCGGGGCAGGTG
GTGTACGGGCCACTGGGAGCCCTCGACACCGCCAACTGGCTGAACATGACCAAGGAAATG
AAGGCAGCCAGGAAACATAAGATGCATGACCATAAGATGTTGCTCTCCCATGGCATGCGA
CCTTTGGCCCTGGACGAGGGCGGGTGGCTGCGGCCCGTTATGTTCGACCCCAGTTCTCGC
ATCGCCAGGGACACAGCATGCCAGATGGTGAAGAGTTTATGCGATTCCTACGAAAGGACG
AAGGCTGTCCTGATATTATTGACGAGCTTCCTTCCCGAGGTCGGAACTGCCGGAGAGGCG
AGCGAACAGTTTCTGCAACTCTATCAGAGTCTGGCGTCCGAGGCTCCTTGGAAACAGTTC
CTGGCTTTACGTGGAGTGCTGCAACAGATCGCCGACCTTATGACCAAAGAGATAGATCAA
CTGCATCGTCTCGAAGAAACCACGCTAACATCCGACCTCGCTCAAGGTACATAA
Protein sequence:
MAGQNPGSPTDFQYFYEDEVYKINNRGQVVFGLVLENYEANSSDQESDIETPIQKGEIRV
VWHPSGTERVISEKSVGLADRSLMPGDVVRRLIAGRDTQRGYCRDIVMTAALQIVGTKHV
IPNVASERLQPLEEFTPDLAVCLDSWVGSSKSVHSKLRLVSSDGSRLEYPDLDTCPLEDY
SMRRRRATPYSSSEFYPGQVVYGPLGALDTANWLNMTKEMKAARKHKMHDHKMLLSHGMR
PLALDEGGWLRPVMFDPSSRIARDTACQMVKSLCDSYERTKAVLILLTSFLPEVGTAGEA
SEQFLQLYQSLASEAPWKQFLALRGVLQQIADLMTKEIDQLHRLEETTLTSDLAQGT