| New model in OGS2.0 | DPOGS200310 |
|---|---|
| Genomic Position | scaffold304:+ 9930-20500 |
| See gene structure | |
| CDS Length | 2940 |
| Paired RNAseq reads | 4356 |
| Single RNAseq reads | 10275 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005587 (0.0) |
| Best Drosophila hit | CG10254, isoform A (2e-76) |
| Best Human hit | ubiquitin-conjugating enzyme E2 O (5e-64) |
| Best NR hit (blastp) | PREDICTED: similar to CG10254-PA, isoform A [Apis mellifera] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to CG10254-PA, isoform A [Apis mellifera] (0.0) |
| GeneOntology terms | GO:0004842 ubiquitin-protein ligase activity GO:0051246 regulation of protein metabolic process GO:0043687 post-translational protein modification |
| InterPro families | IPR016135 Ubiquitin-conjugating enzyme/RWD-like IPR000608 Ubiquitin-conjugating enzyme, E2 |
| Orthology group | MCL12756 |
Nucleotide sequence:
ATGCCAACACGCGCGTTGGCCTGTAACAGGCACGGTATGCGCATGCGTTCTCGCTCCACG
CGTTCCCGCTCTGTTTCCCCCACACACACACACCCCACAGAAGCGTTGAACAATGATATG
GATGTAGACGGCGGTAATGAGAAATTGGAATCTCTTGATGAAGCTTTAAAAGCTGATTCA
AACTGTCCCAGTATTAAAATAGATCCTAGTGGAGATGTCGCGTTACCAGTAGTTAGTAGC
ATAGATGATACTGTCACTGAAGAGAAAAACGATTCCGGAATAAGTCCAGAGCCTCAAGAG
GGGCGAAGGCCTGCTGGTTTGAATGGAGCCCCGCCAGACCAGGACGATGATTCAGATAAC
TGGGAGAACACCAGCAGCGATGGCAGTGATACAGACAGCGGCGCCACGTGGTCGTCTCGC
TGTTCGTCCGCGGCGTCCGGTTCGGTCCGCGGGGCGAGGTCCCCGCAGCTGGCTGTCCGC
TTACTACGAGGCAAGAGACTGAAGCGTGCGGTCCGTAGGGCTCCGCCCGCGCCGCCCCCA
CGACGGACGGATAGGGTCGTCGTGGAGACGCTACACACCACCAGCAGGGCTAACGTCGTT
TGGCAGGACGGTACAATTGAAATGGGTATACCCTCAACACAGTTGTATCCTATCCATCAC
CTGGATGGTCAGGAATGTTTCCCAGGAGACTTCGTCATCAACGGCGCCGCTAGTGTAGAG
GAAACTCAACAGCTGAAGCATAGAGAATACGGGGTGGTGCAGCGAGTAGATCATCATGGG
CGGACTGCCATTGTACACTGGTATAGGACATACACCAGCGTAGACGAACCAGTGCCACAG
ATGTTGTTTGAGAGTGAGATGAGTGTATACGATCTCAAGGATCACCCTGATTTCCAATAT
CGTCCGGGAACTGTGGTCATCAGAGTTGCCAACTTCACTGGCGAAGACGCCAACTGTACC
GCGGGACAGGTTATAGACAATTTTCCAACTGGCCGTGTTAAAGTGTGGTGGGTTGATGGA
CACACCAGTATGTGCTGGCCACAGGATTTATACAAGGTCGGTGAATATGACTCTGAAGAC
GGCGAGCTGTGGGGCTCCGAGGGCACTGTGTCCGAGGATTCGTGGGAAACACAGAGTTCT
GCTCACGAGTTGGACCCACGTACACCTGACGCGCCTGTAGCCGCACCACCGGCCACTGCA
CCGACCTGGTCCGCACCTGCATCAGGTACAGCGGTGGCAACTCCTAGCGAGGAGGCTGGT
CCTTTGCCGAAGCTGTTGGAGCCTCGCGTGGCGGCGCACATCGAGAGAGGACGAGTGGCT
ATGAGGAAACTAGAAGAGATCTTCGCTAAACAACCAACACTACAGAGCCAGGAGATTATG
CGCAAGCTACTGAATCTCTATAAGGACTGCCGGTTCCTTGACAGATTGATGGGCACCACC
TTCTTCCATGAAGATCACTTTTTGGGTCTATTGGAGCGGGTCCGCGAGCGTGGGGCGAGC
ACCCCTCGTGCTGGAGAGCGTCGTGTCCACGAACAGCTAGCTCGTCTGTTCAGCACCGAG
CCCGCCGCTGACTTGGAACACGATGAGGATATGAAGATGGAAGACCGCACCCTCAGACCC
ATCGTAGCAGCTAATGTCACCGTGGAACCCATGGAGACAGAATTCTCATCACCAAAGAAG
CCGCTGAATCTGAACATTGAACAGTCAGCGTCTTGTTCTGATACTAACGTCGCTGAAGGT
CCCATTGAAAACTCTGCTGAAACAGAAGGCGAAGTTGTGTATAGCGGTTCCCGCAACGTT
TGCTACAAGCTGTGCGCTCTCATACACCGACAGCTGGTCAAGGCGCACGCCGAAGTCAAC
CGGAGAAGGCCGCAAGAGTTGGCCGAATTCCTTAACAGCTTAATGAAAAAGCAAAAAGGG
GGCGGGGAGAAGTTACCCTACCACTTTTCAGTTCAATACGAAGCCCTGGTGGTGTCGATG
GTCGATCAGGCTGAGAAGGCGGAGGAGAAAGCATCCACTCATGAGGTCAAGGAACCCGTC
GCCGACACGCCCAAGATGGAAACTGCTGGTCCGGAAGCGCCTCTAGCGTGTGCTGAAGGG
GAGGGGGAGGGCGGTGTAGGGGGCGAGGGGTTCAGCGTGTTGGAGTCAGCACCCGCCGCA
CACAGATTCAGACTGTCCATGTTACAACCCTCGGAGCCGAGGAGCTTTTACTCCGCTGTG
AAGAGAGAGATCAAATTGTTGAAGAGCGATCTACCACCGGGGGTGTGGGTTCGTGGCTAC
GAGGACCGTATAGACCTTATATCTGTGATGATAGCCGGCCCGGCCCGCACGCCCTACGAG
GGCGGCCTGTTTGTGTTCGACGTTCAGCTCGGCGGGGAGTACCCTAGGGCTCCGCCCCTG
TGTCACTACCACTCATACTGCTCTGACAGACTCAACCCTAATCTGTATGAGGATGGAAAG
GTGTGTGTATCTCTCCTGGGGACCTGGTCGGGTCGCGGAGTCGAGGTCTGGGGGAAAGAT
AGTTCCTTGCTGCAGGTTATCGTGTCCCTGCAGGGGCTCATACTGAACGCAGAGCCCTAC
TTTAATGAAGCTGGTTACGAAAAACAGAAAGGCACCCAGCAGGGTGAGGAGAATTCGCGT
ATGTACAACGAGATGGTGCTGTTAAAGTTGGTGCAGTCTATGACTAAGATGGTTATGAAC
CCGCCGGAGCCGTTCCGCGAAGAGATCCTGCAGCATCTGCGTGCGTCCGCTGCAAGTCTC
TGCCGTCGACTGGAGGGGCTGGTTTCTCTGTCCAACGGCCAGCCGTGCGACCTCCCTCCC
CCCGACTACCCCCTCATCCCCGCCTCCCGCGGCTTCTGCCTCACCCTCCGCTCCTCGCTG
GAGTCCTTCCGCAACGCGCTCCGTAAGAACGACATCACAGTCCCCCCCACCACGTTATAG
Protein sequence:
MPTRALACNRHGMRMRSRSTRSRSVSPTHTHPTEALNNDMDVDGGNEKLESLDEALKADS
NCPSIKIDPSGDVALPVVSSIDDTVTEEKNDSGISPEPQEGRRPAGLNGAPPDQDDDSDN
WENTSSDGSDTDSGATWSSRCSSAASGSVRGARSPQLAVRLLRGKRLKRAVRRAPPAPPP
RRTDRVVVETLHTTSRANVVWQDGTIEMGIPSTQLYPIHHLDGQECFPGDFVINGAASVE
ETQQLKHREYGVVQRVDHHGRTAIVHWYRTYTSVDEPVPQMLFESEMSVYDLKDHPDFQY
RPGTVVIRVANFTGEDANCTAGQVIDNFPTGRVKVWWVDGHTSMCWPQDLYKVGEYDSED
GELWGSEGTVSEDSWETQSSAHELDPRTPDAPVAAPPATAPTWSAPASGTAVATPSEEAG
PLPKLLEPRVAAHIERGRVAMRKLEEIFAKQPTLQSQEIMRKLLNLYKDCRFLDRLMGTT
FFHEDHFLGLLERVRERGASTPRAGERRVHEQLARLFSTEPAADLEHDEDMKMEDRTLRP
IVAANVTVEPMETEFSSPKKPLNLNIEQSASCSDTNVAEGPIENSAETEGEVVYSGSRNV
CYKLCALIHRQLVKAHAEVNRRRPQELAEFLNSLMKKQKGGGEKLPYHFSVQYEALVVSM
VDQAEKAEEKASTHEVKEPVADTPKMETAGPEAPLACAEGEGEGGVGGEGFSVLESAPAA
HRFRLSMLQPSEPRSFYSAVKREIKLLKSDLPPGVWVRGYEDRIDLISVMIAGPARTPYE
GGLFVFDVQLGGEYPRAPPLCHYHSYCSDRLNPNLYEDGKVCVSLLGTWSGRGVEVWGKD
SSLLQVIVSLQGLILNAEPYFNEAGYEKQKGTQQGEENSRMYNEMVLLKLVQSMTKMVMN
PPEPFREEILQHLRASAASLCRRLEGLVSLSNGQPCDLPPPDYPLIPASRGFCLTLRSSL
ESFRNALRKNDITVPPTTL