| New model in OGS2.0 | DPOGS215695 |
|---|---|
| Genomic Position | scaffold2617:- 596-8165 |
| See gene structure | |
| CDS Length | 627 |
| Paired RNAseq reads | 907 |
| Single RNAseq reads | 3286 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003597 (1e-99) |
| Best Drosophila hit | Rab-protein 6 (6e-97) |
| Best Human hit | ras-related protein Rab-6A isoform b (5e-94) |
| Best NR hit (blastp) | ras small monomeric GTPase Rab6 [Bombyx mori] (1e-104) |
| Best NR hit (blastx) | ras small monomeric GTPase Rab6 [Bombyx mori] (9e-100) |
| GeneOntology terms | GO:0003924 GTPase activity GO:0001745 compound eye morphogenesis GO:0007264 small GTPase mediated signal transduction GO:0015031 protein transport GO:0005525 GTP binding GO:0006887 exocytosis GO:0007293 germarium-derived egg chamber formation GO:0005515 protein binding GO:0008103 oocyte microtubule cytoskeleton polarization GO:0045451 pole plasm oskar mRNA localization |
| InterPro families | IPR003577 Ras small GTPase, Ras type IPR003579 Ras small GTPase, Rab type IPR003578 Small GTPase, Rho type IPR002041 Ran GTPase IPR001806 Ras GTPase IPR013753 Ras IPR005225 Small GTP-binding protein IPR020851 Small GTPase |
| Orthology group | MCL14165 |
Nucleotide sequence:
ATGTCTACGTCTGGTGAATTTGGAAACCCCTTGCGCAAATTTAAGCTGGTGTTCCTGGGC
GAACAGAGCGTGGGAAAAACTTCTTTGATCACAAGATTCATGTATGACAGCTTTGACAAC
ACTTACCAGGCGACCATCGGTATAGATTTCCTGTCAAAGACAATGTACTTGGAGGACCGA
ACGGTTCGTCTGCAACTCTGGGACACGGCCGGGCAGGAACGCTTCCGCTCCCTCATACCC
TCATACATCAGAGACTCGACTGTGGCAGTCGTGGTCTATGACATCACTAACGCGAACTCA
TTCCATCAGACCTCCAAATGGATCGATGACGTGCGTACCGAGCGTGGGTCAGACGTCATC
ATCATGCTGGTCGGCAACAAGACGGACCTCTCGGACAAGAGGCAGGTCTCCACCGAGGAC
GGAGACAGGAAGGCTAAGGAGCTGAACGTCATGTTCATAGAGACCAGCGCCAAGGCGGGA
TACAACGTGAAGCAGCTGTTCAGACGCGTCGCAGCAGCTCTGCCCGGCATGGACTCCGCG
GAGAGCAAGCCGCCTGAAGACAGTATCCTTTATGCGACATACCACCTACCACTTATCACT
CACCACACATCCGGGCGTACCGTCTGA
Protein sequence:
MSTSGEFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDR
TVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVI
IMLVGNKTDLSDKRQVSTEDGDRKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMDSA
ESKPPEDSILYATYHLPLITHHTSGRTV