| Genomic Position | scaffold5696:+ 456-2081 |
|---|---|
| See gene structure | |
| CDS Length | 1134 |
| Paired RNAseq reads | 0 |
| Single RNAseq reads | 0 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002632 (2e-10) |
| Best Drosophila hit | ND |
| Best Human hit | ND |
| Best NR hit (blastp) | endonuclease-reverse transcriptase HmRTE-e01 [Heliconius melpomene] (4e-73) |
| Best NR hit (blastx) | endonuclease-reverse transcriptase HmRTE-e01 [Heliconius melpomene] (2e-64) |
| GeneOntology terms | GO:0003964 RNA-directed DNA polymerase activity GO:0006278 RNA-dependent DNA replication GO:0005622 intracellular GO:0008270 zinc ion binding GO:0003723 RNA binding |
| InterPro families | IPR000477 Reverse transcriptase |
| Orthology group | MCL10012 |
Nucleotide sequence:
ATGAAGGCTGCCAAGGAAGTTTCGGTTATGGTACACGAAACCTCGATGAAAGAAACGAGG
AGACACATAGCTCTCACTAGACATATTTCAAACGAAGAATTTTATAACAACCTCGAGAAG
ACGACAACACAGTACGATGTACATAAAATAGCAGAAAGTAGATATCAAAGTACAAAGGAT
ATAACATCTGAAAAATATATTAAAGATAAAAATGATAAGCTCTTAACTGATGACGATAAC
ATAAAATCAAGGTGGGTTGAATATTACAAACATCTTCTTAACATAGAACATCCAAGGAAA
CGTAACCCTATACCGCCCACGGAAGTTATGGGACCTCTTGCACCAGTAACACTAAGTGAG
ATCCATAAAGCCCTTTCTCGCATGAAGAACCATAAAGCCACAGGTCCAGATGAAATTCCT
TCTGAAATTTGGAAGATGACATCAAGAGACGGGTTACCATGGCTGCTTGGATTATTCAAC
AAACTGATTGCAGGCGAACCATTCCCAAATTCATGGAGAAAAAGTTTTCTTGTTCCATTT
CATAAGGGAAGGGGCGATGTAAGAGATTGTGCCAACTGCAGAGTAGTCAAATTTACGGCC
CATACTTTCAAAATCGGGGAAAAAATAATAAACAACCGCTTAAGAGATATCATTAAATTA
ACACCTAACCAATGTGAGTTTTTAGCCGATAAAAGTTCCTCAGACGCAATACAGACAGTG
CGCATACTGATAGAAAAGGCAAAGAGGAACCAAAAAAATATCCACATTATTTTTATAGAT
TTGGAGAAGGCATTTGATCATATAACTCGCGACCTGATATGGAAAGCATTGAGAGATCAA
TTTGTTTCAGAAAAATACATCACCTTAATTCAGGATATGTACGACAATGTTACCACACAA
ATAGTTACTCTAGCAGGAACAGACGAGGAATTTACCATAGCCGTCGGTGTACTACAAGGG
TCGGCCCTAAGCCCTTTACTTTTTAACATCACTATGGCCTACATCACCAAAAGATACCAG
AAACCTCTGTCGTGGAACATTCTTTACGCTGACGATGTTGTATTAATTTCTGAAAATAAA
AGCGGCCTACAAAATGATTTCAATCAATGGATAGAAGCTTTGGAAGATAAGTAA
Protein sequence:
MKAAKEVSVMVHETSMKETRRHIALTRHISNEEFYNNLEKTTTQYDVHKIAESRYQSTKD
ITSEKYIKDKNDKLLTDDDNIKSRWVEYYKHLLNIEHPRKRNPIPPTEVMGPLAPVTLSE
IHKALSRMKNHKATGPDEIPSEIWKMTSRDGLPWLLGLFNKLIAGEPFPNSWRKSFLVPF
HKGRGDVRDCANCRVVKFTAHTFKIGEKIINNRLRDIIKLTPNQCEFLADKSSSDAIQTV
RILIEKAKRNQKNIHIIFIDLEKAFDHITRDLIWKALRDQFVSEKYITLIQDMYDNVTTQ
IVTLAGTDEEFTIAVGVLQGSALSPLLFNITMAYITKRYQKPLSWNILYADDVVLISENK
SGLQNDFNQWIEALEDK