New model in OGS2.0 | DPOGS205929  |
---|---|
Genomic Position | scaffold20:- 272107-290976 |
See gene structure | |
CDS Length | 2652 |
Paired RNAseq reads   | 303 |
Single RNAseq reads   | 1123 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA002861 (6e-167) |
Best Drosophila hit   | ND |
Best Human hit | ND |
Best NR hit (blastp)   | PREDICTED: similar to conserved hypothetical protein [Tribolium castaneum] (7e-69) |
Best NR hit (blastx)   | PREDICTED: similar to conserved hypothetical protein [Tribolium castaneum] (4e-48) |
GeneOntology terms   | ND |
InterPro families   | IPR001478 PDZ/DHR/GLGF |
Orthology group | MCL16039 |
Nucleotide sequence:
ATGTCGGCTGTGATGAGCACCCTGTCTATGATCAGCGGCGGCAGGAGGGCCCATCGTAAG
CTCACCAATTCAAGAAAATCTGGCCAGTTCTCCGACGCCGGAGAGGACAGAACCCGCAGT
CAGCATGACCTCAACAAGCAGCGCTCCGCCTCACTCCAAACCCTCGAGGCTGGAGGGGCC
ATCAACCTTGAAACCCTGGAGGCTAAGATGGCAAGCATCGAGGTCTCCCTGGCGGGGTCG
CGGCGCCGCAGTGCAGCGGGTCGTGACACCGCACGAGACAACACGCGCGAGCTGGACGCG
CTGCGAGCCGCTATTAACGACAAGGACATCCTCATACAGAATTTAAAGAAACAGTTGAGC
GCTTCACTGAGCGCCGCTCGCCTGGGCGTGCAGGCGTCGTCCCCCGTCCCGTACTCAGGT
CGGGAGGACGCTCCGGTGTTGTCCCCTGAGGAAAGACGAGCCTTGGAGGAGAGAGCCGCC
GCCGTCCGCTCAGACCTTGATGCGAGGCGAGCTAACATACAGGAACTGAAGAGAAGATTA
GAAAAAACACACGTCACAGAGAACATAGACAGTCGTATCGAGCAGGCGGAGCTGCAGTAC
CAGCTGGGCCGCGAGGAGCTGGAGCTGTTGACGCTGGGGGAGCAGGCGAGAGCCCTGGCG
CTGCTCATGGACCAGGCCGACGCCGCAGCACGCGCTCGACGCTCCACACTCTTCAGTACG
GTCCGTGACTGCGGCGGCAGTGCGGTGTTGGTGTCAGCGGAGGCCCGGGACAACACATGG
AGTGCCGCCATCCGGGGAGCCGCAGTCGCCGTGGAGTGGAGCGACCACCCTGCCCTCAAG
CAAGGCGACCGAGTTCTGGAAGTAAACGGCACGTCGACACTGTGGTGCGGGTCCGAGGAG
CTCCGGCGCGCCCTGAGCGCAGCCTCGCCCGCACGCCTCGTGCTGCTCCGAGCGCCGCCG
CCCGCACTCACACAGGTACATACGTCATACCATAGACCAAGCGAGGCGGCATCTTTGCGC
TCCGAGCTGGGCGCGCTACAGGCGGCGGCGGAACACGCGGAGAGAGCCAAGCAGGGACTG
AGGCAGGACAACACCAGGCTCACCCACCGCATCTCATACCTCGAGGAACAGGTCGCCGAG
CTACTGGCGCGACACCCGCAGCTCCAACCAGTAAGCAGTGCCGACAGCTGTATCACTGTC
AACAAAACGAAGAGAAATGTTACCAACATCAACATCACCTCGGAGCCGGCGACCAAACAG
ACCCCAAAATCTGAGGTGCAGGTGTTCCAAAAGGGACCCGACATCACGGCCATAGTCGCC
AAGTTACCAGGACTGGACGGGGCCGAGTCGAGCAATCTGCCCGTGGTGAGGCCGAGATCT
AACGCGTCGGGAGCCTCCTCGAGACTGGCGACCTCTCCCCGGACCTCCCCGGCCCCCAAC
AGGCGGGCCCACAGCTCACACAGCCTGGAGCACCGCGCGGGCCGGCTGCGACATTCCCTC
TCACATCACTGCATCCACGACTACAGCGCGGAGACCGACGCCGCCATCAGAATGATAGAG
AGGAACCAGAGACATATGGAGAGGCAGAGGATCGACACCGAGAAATACAATAGAACGAAG
CGGGAGGATCGGTTGAGGTCCGACAGCGACCTGGACGTCCAGGGAAAGGAGAACACCAGG
AACGACATAAAGAAGGCGGCGGAAAGAATAGAACAGAGCATCAAGAAGACGAACTGGGCC
GAGAGGAAGACGCTGTCCATCATAGAGCAGCTGAAGAGATCACAGCGGATGCGCAAAATG
AAGAAGAACGAAAGTTCCGAGAACATCCAAGTGGAGAAGGAGCGGCATCACTCCTACAGC
AGGATAGACGGGAAGGTGCTGGAGAACGCGCACAAGTCGAGCCGGAGGACGGCCAAGGGG
CAGTCCCGGAGCGCCAAGTCGTCGGAGTTCGAGTCCGAGTGCTCCGACTACCCGGGCGGG
GACGTGTTCAGCAACTCGCCGCGGCTGGCCGCCACCGACTACGACGAGAACAGTTCCAGG
ACGACTCGCTACCTCAAGATAGACGACCTCCGGGAAGACTGCAAGTCCAGACCGACGCCC
CCCAGGAAGCCGCTGAGACTGTCACTGCACAAGGCGAAAAGCGCCCACTCGCTAGTCAAC
GGCAGCGAGTCGGAGGCGAGCAGGCCGCCGTCCGAGGCGCAGAACGGAGACGCCGCGTCA
CACTGCAAGAGGCCCGTGAAGCGCTCGCACGCCGCGGACAAACACACCAGGGAGAGGCTT
CGGGACCCGCGAGCCACGCCGAGGCCTGCTCGACGGACCGGGCCCGCCCCGCCCGCCGAC
AGGCTGTACTCGGACAAGTGGGCGAGGCGGCGTCCCCGGCGGGGCCTGCGGGGCCGTCCC
CGCGCGCGGCGCACGGCTCGGGCCAATATCAATGTAACAAAACAAATAACGACGCTCATA
TTTACAACAAAACATTCCAACATTCCGTTACACACATCACAAGCCCGGCGCGGGTCCGGC
GGGCTGCGGTCCCCCGGGCCCCGCTGTCAATCTTCCTCGGCGATGCCCCAGCTGCCGCAG
GTCCCAGCGGATGTCGTCAGCCGCTCTCTAGTGATACGGCACAGCGCCACACTCTCTAAC
TCTTACACATAA
Protein sequence:
MSAVMSTLSMISGGRRAHRKLTNSRKSGQFSDAGEDRTRSQHDLNKQRSASLQTLEAGGA
INLETLEAKMASIEVSLAGSRRRSAAGRDTARDNTRELDALRAAINDKDILIQNLKKQLS
ASLSAARLGVQASSPVPYSGREDAPVLSPEERRALEERAAAVRSDLDARRANIQELKRRL
EKTHVTENIDSRIEQAELQYQLGREELELLTLGEQARALALLMDQADAAARARRSTLFST
VRDCGGSAVLVSAEARDNTWSAAIRGAAVAVEWSDHPALKQGDRVLEVNGTSTLWCGSEE
LRRALSAASPARLVLLRAPPPALTQVHTSYHRPSEAASLRSELGALQAAAEHAERAKQGL
RQDNTRLTHRISYLEEQVAELLARHPQLQPVSSADSCITVNKTKRNVTNINITSEPATKQ
TPKSEVQVFQKGPDITAIVAKLPGLDGAESSNLPVVRPRSNASGASSRLATSPRTSPAPN
RRAHSSHSLEHRAGRLRHSLSHHCIHDYSAETDAAIRMIERNQRHMERQRIDTEKYNRTK
REDRLRSDSDLDVQGKENTRNDIKKAAERIEQSIKKTNWAERKTLSIIEQLKRSQRMRKM
KKNESSENIQVEKERHHSYSRIDGKVLENAHKSSRRTAKGQSRSAKSSEFESECSDYPGG
DVFSNSPRLAATDYDENSSRTTRYLKIDDLREDCKSRPTPPRKPLRLSLHKAKSAHSLVN
GSESEASRPPSEAQNGDAASHCKRPVKRSHAADKHTRERLRDPRATPRPARRTGPAPPAD
RLYSDKWARRRPRRGLRGRPRARRTARANINVTKQITTLIFTTKHSNIPLHTSQARRGSG
GLRSPGPRCQSSSAMPQLPQVPADVVSRSLVIRHSATLSNSYT