| New model in OGS2.0 | DPOGS205937 |
|---|---|
| Genomic Position | scaffold20:- 178083-181007 |
| See gene structure | |
| CDS Length | 2853 |
| Paired RNAseq reads | 281 |
| Single RNAseq reads | 711 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002870 (0.0) |
| Best Drosophila hit | CG4078 (0.0) |
| Best Human hit | regulator of telomere elongation helicase 1 isoform 1 (0.0) |
| Best NR hit (blastp) | fanconi anemia group J protein [Culex quinquefasciatus] (0.0) |
| Best NR hit (blastx) | regulator of telomere elongation helicase 1 rtel1 [Aedes aegypti] (0.0) |
| GeneOntology terms | GO:0004003 ATP-dependent DNA helicase activity GO:0005524 ATP binding GO:0005634 nucleus GO:0010569 regulation of double-strand break repair via homologous recombination |
| InterPro families | IPR010614 DEAD2 IPR013020 DNA helicase (DNA repair), Rad3 type IPR014013 Helicase, superfamily 1/2, ATP-binding domain, DinG/Rad3-type IPR006554 Helicase-like, DEXD box c2 type IPR014001 DEAD-like helicase IPR006555 Helicase, ATP-dependent, c2 type |
| Orthology group | MCL13416 |
Nucleotide sequence:
ATGTCGGAAATAATGATTTATGGGATACCGGTTACTTTTCCTTTTGAACCTTATGAGGTT
CAAAAATCCTACATGGAAAAGGTTATTGAAAGTTTACAAAATAACACAAATGCAGTACTG
GAATCACCGACGGGAACAGGAAAAACTCTCAGCCTTTTATGTTCGTCGTTAGCTTGGCTG
TTGGTGAAAAAAGCACAATTACAAATGAATGCACAACTCGGTAACTTTTCTGAACACAGT
GGATATAGCAATGCATTGCGAGACAATCTGAAAAGTAACGCAGGAAAATCTAAGGATAAT
ACATCATGGGGTATGCCAAAGATTATATATTCCTCTCGTACGCATTCACAACTGACTCAA
GCTATGCAGGAATTGAAAAGATCCAGTTATCGGCATGTAAAAGCAGCAGTTTTGGGCTCG
AGAGATCAGATGTGTATTCACCCAGAAGTATCAAAGGAAACAAATAATATGAATAAAGTT
CACATGTGCCAGCTGAAAGTAAAGTCCAGGACTTGTCACTTCTACAACAATGTTGAATCA
AAAAAGGATGACAGATCTGTGAAGGGTGATGATATCTTAGATATAGAGGATTTAGTTAGT
GTCGGTAAGAAATTAAAATGCTGCCCATATTATTTGTCCAAGGAACTCAAACAAGACGCT
GATATAATATTCATGCCATATAACTATTTATTAGATCCAAAATCTAGACGGGCAAATGGA
GTAGAGCTCATGAACAATATAATTATACTGGATGAAGCTCATAATGTAGAGAAAATGTGT
GAGGAGTCTGCTTCACTACAAATTAGAACTACAGATGTTGCTTTGTGTATAGACGAAATC
ACTTACATAATGAAGTCATTTGCCGATGGAGAGGATTTAGACGTTACACTGGATCCAAAC
CAACCAAAGGATTTCACATGCGATGATTTGTGTACACTAAAAGAAATGATGTTGGCATTC
GAGAAAGCTGTGGATGAAATCCAAGTGGGTTCCGAAGGGTCTACATTTCCTGGAGGGTAT
ATCTTTGAGCTTCTATCTAAAGCTGAGATCACAGACAGAAATCAAATGTCAGTTATAGGT
TTAATAGAAAATTTAATTCAGTATCTTTCAACGGCTAGCTCCTCACCATTTACAAGAAAA
GGTGTGGGATTACAAAAGATTGTTGATCTGTTAAATGTGGTCTTCAGTGGAACTACAGTA
GCTTATAAAGAGAGAGTCAAGCTTTGCTACAAGGTCCATGTACAGGTGGAAGATAAGAAA
AATAATAAGAAAACAGATAGCTGGGGTGCTCTTAAAGCCTCCAATACGAAATCCGCTGAG
AGAGTTTTGAGTTACTGGTGTTTCAGTCCAGGATTTGGAATGAAGCAGTTATTGGAACAA
AATGTTAGAAGTATTATATTAACAAGCGGTACTTTAGCTCCACTGAAACCTCTTATATCT
GAACTGGGTATCCCCATAGGAGTTCAGTTAGAGAACCCACATATAGTGAAGTCCAATCAA
ATACATGTAAAAATCATTGGTCAGGGACCAGATTCTGAAACGTTAAACTCCAATTATCAG
AACAGGAATAATCCCAAGTATATTTCATCTTTGGGAAGAACCATACTTAGCTTCTCTCGA
GTTATACCTGATGGATTATTGGTTTTCTTTCCGTCTTACCCCATCATGACAAAGTGTCAA
GAAATGTGGCAGGCTGAAGGCATCTGGTCAAGCATAAATAGTATAAAACCAATATTTGTT
GAGCCACAAAGAAAGGACACATTCAATAGCATTATCAATGACTACTACAGTAAAATAAGG
GATCCTAATAGTAGAGGCGCATGCTTTATGGCAGTTTGTAGAGGGAAAGTATCTGAAGGT
CTGGACTTTGCTGATATGAACGGGAGAGCAGTTATTATTACGGGATTACCTTTTCCTCCG
CTTAAAGATCCCAGAATAATATTGAAGAAGAAATATTTGGAAGAACTTAGAGTCAATCAA
AAAGAATACTTATCTGGCGACGAGTGGTACTCATTGGAGGCAAGCAGAGCTGTGAACCAA
GCTATTGGTAGAGTCATCAGACACCAAAATGATTATGGCGCAATTCTATTATGTGACACC
AGATTTAACAACCCTAAATTAAAAAATCAATTATCGGCTTGGCTCCGAGACCATATTGTG
GTGTCAAATAAGTTTGGGTTGACTGTGAGCGAGATCTGCAGATTTTTTAAAAATGCTGAA
GCCTCTTTACCCACACCTAAACTGAAACCATTACTTCCTCATGAGTCTAACACTAACTTC
AAAGAGTCCGGTGCTCCGAGTTTAACTGGTGTATCATTTCCTGTAACCAACTCTAGAACC
GTAAATAAAGCTAAAACAATAAACACAGTCAGTCAGTATCCCAATTCTAACGAAGTGTAT
GCAGATTTTTCTATAGATTTTTATAAGAACGCCCAAGCTTCAACATATGTTAACGAGTTT
AAACCTAAAGCCACCAAGGATTTATTCAGTGCTTTAGATGGCAGCAGTTCCACTCGGGGG
ACTTCAGAGTCTCTCGTTACTATTAATAAGAGACCTTCACAAGATATCCCCATCCTCGCA
GCATCGAAGAAGAAAAAGTTGAAGATCAAATCATTTGGTTTTGAAGAAAATCTCCATAAT
GGAGGAACATCAGAGTTGCCCAAAGAAAGAATGGCTCCAACATCGTTAATCGATTTCGTT
AAGGAAATCAAAACTTTGCTAGAACCAGACGAATATAAAAAATTTCAATTGTCAATCTCA
ACTTACAAGAAGGAAGGCATGAAGAGATTCTTGAAGGATGACCACAAACAGGCATTCGAC
GAATACTGTGATAATGTAAAGTTTCCTAGCTGA
Protein sequence:
MSEIMIYGIPVTFPFEPYEVQKSYMEKVIESLQNNTNAVLESPTGTGKTLSLLCSSLAWL
LVKKAQLQMNAQLGNFSEHSGYSNALRDNLKSNAGKSKDNTSWGMPKIIYSSRTHSQLTQ
AMQELKRSSYRHVKAAVLGSRDQMCIHPEVSKETNNMNKVHMCQLKVKSRTCHFYNNVES
KKDDRSVKGDDILDIEDLVSVGKKLKCCPYYLSKELKQDADIIFMPYNYLLDPKSRRANG
VELMNNIIILDEAHNVEKMCEESASLQIRTTDVALCIDEITYIMKSFADGEDLDVTLDPN
QPKDFTCDDLCTLKEMMLAFEKAVDEIQVGSEGSTFPGGYIFELLSKAEITDRNQMSVIG
LIENLIQYLSTASSSPFTRKGVGLQKIVDLLNVVFSGTTVAYKERVKLCYKVHVQVEDKK
NNKKTDSWGALKASNTKSAERVLSYWCFSPGFGMKQLLEQNVRSIILTSGTLAPLKPLIS
ELGIPIGVQLENPHIVKSNQIHVKIIGQGPDSETLNSNYQNRNNPKYISSLGRTILSFSR
VIPDGLLVFFPSYPIMTKCQEMWQAEGIWSSINSIKPIFVEPQRKDTFNSIINDYYSKIR
DPNSRGACFMAVCRGKVSEGLDFADMNGRAVIITGLPFPPLKDPRIILKKKYLEELRVNQ
KEYLSGDEWYSLEASRAVNQAIGRVIRHQNDYGAILLCDTRFNNPKLKNQLSAWLRDHIV
VSNKFGLTVSEICRFFKNAEASLPTPKLKPLLPHESNTNFKESGAPSLTGVSFPVTNSRT
VNKAKTINTVSQYPNSNEVYADFSIDFYKNAQASTYVNEFKPKATKDLFSALDGSSSTRG
TSESLVTINKRPSQDIPILAASKKKKLKIKSFGFEENLHNGGTSELPKERMAPTSLIDFV
KEIKTLLEPDEYKKFQLSISTYKKEGMKRFLKDDHKQAFDEYCDNVKFPS