| New model in OGS2.0 | DPOGS205945 |
|---|---|
| Genomic Position | scaffold20:+ 182682-187712 |
| See gene structure | |
| CDS Length | 2283 |
| Paired RNAseq reads | 962 |
| Single RNAseq reads | 2289 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002831 (9e-80) |
| Best Drosophila hit | StIP (8e-178) |
| Best Human hit | elongator complex protein 2 (1e-147) |
| Best NR hit (blastp) | GJ22219 [Drosophila virilis] (0.0) |
| Best NR hit (blastx) | StIP [Drosophila melanogaster] (0.0) |
| GeneOntology terms | GO:0006368 RNA elongation from RNA polymerase II promoter GO:0000502 proteasome complex GO:0043248 proteasome assembly GO:0061133 endopeptidase activator activity |
| InterPro families | IPR015943 WD40/YVTN repeat-like-containing domain IPR019781 WD40 repeat, subgroup IPR011046 WD40 repeat-like-containing domain IPR019782 WD40 repeat 2 IPR017986 WD40-repeat-containing domain IPR001680 WD40 repeat |
| Orthology group | MCL14807 |
Nucleotide sequence:
ATGAAAGTATCTGTAGAGCAAGTTTATACTTCAGTTGCTTGTAACAGAGTTCCAAAGATT
GTTGATTGGAATAAGGAAGGGCTTATTGTGTACGGCGCTTCAAATGCTGTTGTTATATAC
GACACGAAAATTAAAGGCCAAGACCCTCTTACAGTACTTAGTCATCATCAGTCAAAAGTA
AACTCAGTGAAATGGCTGTATAAATCTGGTGGCTCATGTACAGAATTTCTATCATGTTCT
GCTGACAAAACCGCTGCAATATGGTCATCAGTGGACGGGGTCTGGAGTATCACAAGCAGT
CTCGTCGGTCATAATGATGGTGTAACATGTGTTTATGGAGTTTATGTTGAGGAAAATTTA
GTGGTATATACCGCCTCCATTGATTCTACTGTGAGAGTTTGGGAGAGAAAAAATGGTATC
ACAACATTGAAACAGATAATTTCTTTAAACTCTGGACTATGTCTCACTCTGCATGCACAC
ATTCTGCCAACATGTAATCAACCTCTTTTGTTCTGTGCCCTTGATGACCATAAAGTGCAC
ATATTTGCTGATGACGATGGGTATCATAGGGTCCACGCGCTCGTGGGACATGAGGACTGG
GTTCGAGGGCTGGATGTTGTAGATGTAGACGAAAGCACAGTAATGTTGGCGTCGGCATCA
CAAGACACATACATTCGATTGTGGAAAATTGCACAACACAAAGAGACAGTGGCTAGCGGT
GTCAGGGTGGAAGAGAAAACGTTCATGGCATACAATCAGGAATGGTCGGTGAAACTGGAC
GCAGTTCTAGCCGGTCATGAAGGCTGGGTTTACGGTGTTCAATGGGAAAAAAATATAAAT
GAAGATGGCGCCACCTACCGTCTGTTGACATCGTCCCTTGATAAGACACTCATCATCTGG
CAGCTCTCCGAGGTGTGGGTGGAGAGTGTTCGTGTGGGAGACGTGGGAGGGAACGGACTC
GGGTTCTATGGCAGTAGGTTTGGCCGGGACGCCGTACTGGGCCACGGATATAATGGATCA
CTACATATATGGAGACTGGATAAGGAGAGCAAACAATGGCAGCCGTCTGTGGTGGTGGGC
GGTCACTTCGCTGGCGTGGAAGACATCCGGTGGGAGTCTCGAGGACGGTACCTCGTCAGC
GTGGCCCTAGATCAGACCACGAGGTTGCACGCGCCTTGGAGGAGAGCAGACGGTGCCGGA
GTGGAGTGGCACGAGATATCCCGGCCCCAGGTGCACGGGTACGACCTGTGCTCGGTGTCG
CTGGTGTCGTCGACCCTGGTCTCCGCCGCCGAGGAGAAGGTGCTGCGAGTGTTCGCTCCG
CCCCAGAACTTCCTCCACAACTTCCAGAGGATCACTGGAGAGGAGCTGCACTGTACTGAA
GTGTGTAACCCCGAGGGGGCGTCGGTGCCGTCCCTGGGGCTATCCAACAAGGCCGTGTTC
AGCGGAGACGCGGCGGGGGACGGGGACGACAGCGACGGGTACTTTGTACCCGTGGAATTG
CGCGAGCCACCGACCGAGGAGATTTTAATGCAGAACACTCTGTGGCCGGAGACTCACAAG
CTGTACGGTCACGGATACGAGCTGTTCTGTGTGGACTCCAGCCCGGACGGAGACCTGGTC
GCCTCCGCCTGCCGCAGCACCACGCAGGAGCACGCGGCCGTCATAGTGTGGGAAACCAAG
ACCTGGCAGCAGATCCAGAAGTTGGTGTCGCACACGCTGACGGTTACACAGCTGGCCTTC
TCACCGGACAGTCGACACCTACTCTCCGTTTCTCGCGACCGAAAGTGGACTTTATACACG
AGACGAGAAGGCTCAAACTCGTTCACCATCGCGGCACACACGGACAAGACAAACGGCGTT
CACACCAGAATCATCTGGTGCTGTGCCTGGGCGGTGACTGGACACGCCTTCGCCACTGGA
TCCAGGGAAGGAAAGGTCTGCGTTTGGACCAAAACGGAAGTAACGAGCGACTCATCGCTG
AGAGACTACAGTTTGTTGGGTAAGCCACTGGAGGTCCCGAACTCGTCGGTGACCGCTCTG
TCGTTCGCCCCCCTCGCTGACGTGCAAGTGGTGGCCGTGGGGACGGACTGCGGCCGGATC
AGGATCTACAGCTTCGACCTCGCCTGGAGCTTACTGCACGAAATGAACAACAGCTCGGCC
CACCACCTCACGGTGAAGAGACTGCTCTTCAAGCCGAGGACATCAGGTGACAAAGAATTG
GTGCTGGCGAGTTGTGGGAGCGACAACTTTGTTAGAATAAACACCCTGTATATAGAATAT
TGA
Protein sequence:
MKVSVEQVYTSVACNRVPKIVDWNKEGLIVYGASNAVVIYDTKIKGQDPLTVLSHHQSKV
NSVKWLYKSGGSCTEFLSCSADKTAAIWSSVDGVWSITSSLVGHNDGVTCVYGVYVEENL
VVYTASIDSTVRVWERKNGITTLKQIISLNSGLCLTLHAHILPTCNQPLLFCALDDHKVH
IFADDDGYHRVHALVGHEDWVRGLDVVDVDESTVMLASASQDTYIRLWKIAQHKETVASG
VRVEEKTFMAYNQEWSVKLDAVLAGHEGWVYGVQWEKNINEDGATYRLLTSSLDKTLIIW
QLSEVWVESVRVGDVGGNGLGFYGSRFGRDAVLGHGYNGSLHIWRLDKESKQWQPSVVVG
GHFAGVEDIRWESRGRYLVSVALDQTTRLHAPWRRADGAGVEWHEISRPQVHGYDLCSVS
LVSSTLVSAAEEKVLRVFAPPQNFLHNFQRITGEELHCTEVCNPEGASVPSLGLSNKAVF
SGDAAGDGDDSDGYFVPVELREPPTEEILMQNTLWPETHKLYGHGYELFCVDSSPDGDLV
ASACRSTTQEHAAVIVWETKTWQQIQKLVSHTLTVTQLAFSPDSRHLLSVSRDRKWTLYT
RREGSNSFTIAAHTDKTNGVHTRIIWCCAWAVTGHAFATGSREGKVCVWTKTEVTSDSSL
RDYSLLGKPLEVPNSSVTALSFAPLADVQVVAVGTDCGRIRIYSFDLAWSLLHEMNNSSA
HHLTVKRLLFKPRTSGDKELVLASCGSDNFVRINTLYIEY