| New model in OGS2.0 | DPOGS207403 |
|---|---|
| Genomic Position | scaffold518:- 148605-150962 |
| See gene structure | |
| CDS Length | 2064 |
| Paired RNAseq reads | 4576 |
| Single RNAseq reads | 11141 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009370 (0.0) |
| Best Drosophila hit | CG16974 (3e-123) |
| Best Human hit | leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2 precursor (4e-25) |
| Best NR hit (blastp) | PREDICTED: similar to AGAP008611-PA [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to AGAP008611-PA [Tribolium castaneum] (0.0) |
| GeneOntology terms | GO:0005515 protein binding |
| InterPro families | IPR013783 Immunoglobulin-like fold IPR001611 Leucine-rich repeat IPR013098 Immunoglobulin I-set IPR007110 Immunoglobulin-like IPR003591 Leucine-rich repeat, typical subtype IPR003599 Immunoglobulin subtype IPR003598 Immunoglobulin subtype 2 |
| Orthology group | MCL16842 |
Nucleotide sequence:
ATGATTAGGTTGAAGAAGTTGGATTTATCTTATAATAGGATCGCCACTTTCTTAGATTAC
TTTTTTAAGCCTAATAGCCAACTGAAAACTCTGTTCCTAAATAATAATAGTCTAGTTAAA
ATTACATCTCATTCTCTAGTCAGCCTTAAGGAATTGGAAACTCTCGATCTATCTAGCAAC
AAATTAGACAATATTCCTAAATCTATATTCGACAGCCTGGAACAGTTGAAGGATATCAAT
CTAGGTTACAACAACTTCGATAACATATCACAGGATATATTTAAAAAGCTGAATAAGTTA
GAGACGCTTAATTTAGGTGGAAATAGACTTAAGGTGTTGCCCCCGACGCTGTTCCAATAT
AACGAAAACTTACTTGCAGTCTACCTCGAACACACGGCAATTACCGTCATACAGAACACC
AACTTTAAAGGCTTACAGAAACTCAAGCGTCTGTACGTCAGGTACAACTCCATGTTACGG
GAAATAGAACCCTTCGTGTTCCAAGACACGCCGGCCTTGACTCATCTGGACATTACTGCC
AACGCTCTGACATACCTGCCGCTATCACTGCAGATGTTAGAGAACTTACAGGAGTTGAGA
ATAGGGAATAACTCGTGGGCCTGTGACTGTAGGATGGCCTGGTTCGTCAGCTGGATAGAG
AACAGAAAAGATATCGTGAGGTCGGATTTGAGTTGTCGGTGGGCTTACAGGGACGACATG
CTGAGGTATCTGAACAGCACCAACTGTAAACCGCCACAATTGATAAAGAGCAGTCCACTG
TCGTTACACAGGCTCCAGACGGACGCACTGCTGGAGTGCAAGTTCGCTGGCAACCCAGCC
CCATCCATAACCTGGATAACGCCAACGAGAAACGTGTTCCATTGGAATCCAGATTCATCC
CCGCCGGACATATTCCAGAAACATGGAATAGCACACGATCAGTATTACCGCCCCTTAGAT
TACAGTAACTCGAGAGTCAAAATCCGCGACGACGGTTCCCTCTTCATAGCCGACATCCAT
CGTGAGGACAGCGGCACCTACCTGTGCCTGGCCTCGAACCCCTCGGCCAACGCCACCGCC
GAGGTCGTCCTCAACATAGATCCCATGACCATGTTAGAAATCAAAATCTATAGTTTGCTG
TTCGGAGCGATGTGTGCACTGAGTTTCTTGGGTCTCACTTTGCTAGTGCAGGCTCTGCGT
TATATATTCTATAGATATCGTCTCCTAGAGACCTGCTGTAGCTGTTGTACTTGTGTGAAT
CGCGACGCGCCGCGAACCAGACAGATATATCACATGCTGGACAACATCGAACAATATAAG
AGACAACAATTGGAAAAACTCCGAGAAAACTACGCCGTTCAGGTACATCGAATCAAAGAG
AACTGCACCCAGCAGATGGAGTGGATTCAGAGTAGCTACTCGACACAAGCGGCTCACTTG
AGAAATATCAGAGATATCGGAACCAACCATTTGACGTCTATGAAAGATCAGTACTACGAT
CAGGTGAAACGCGTCCGCGAGTACTCCACGTGCCAACTGAACTGGGTCAGAGAGAACTAC
GTGTTCCAGAGGAACAAGATACGGAAATTCAGCGCGCACCAGATACTGAGGCTGAGAGAG
TCGTACAAATATCAGCAGCAGACGCTCAACAAAGTGCTGGAGAACCTGCCCAGTCTGTAC
TTCGAGAACTGCAGGAGCGGTTCGTGCGGCCGGAGCGACTCCATGGCCTTCGACCCCGAC
GTGGAGGTCATCGACATGTACCTCAAGACCAAGATCGAGAAGCTGGCGCGTCTGCCGCCG
CACTTCGACGACGAGAGCAAGGTGTCGGTGTACTACACGCCCACCGAGCGCTCGCTGGAG
TCGCGGCGGGGCTCGCTGGCGCGCGCGGAGCCCGAGGCCGTCCACATCAACATGATCGAG
CGCCCCCCTTCGTGTGTCGTGCGAGTCGGTAGTGTCGTTTGTTGTGACGGTGTGTGCACT
GGCCGACGGCCCTCCCCCCCTCTCCCCTGTCGGCCTGTCGGTGTCCTTATTATTATTACT
ATTAGTCGTAGTGTCACCGTCTAA
Protein sequence:
MIRLKKLDLSYNRIATFLDYFFKPNSQLKTLFLNNNSLVKITSHSLVSLKELETLDLSSN
KLDNIPKSIFDSLEQLKDINLGYNNFDNISQDIFKKLNKLETLNLGGNRLKVLPPTLFQY
NENLLAVYLEHTAITVIQNTNFKGLQKLKRLYVRYNSMLREIEPFVFQDTPALTHLDITA
NALTYLPLSLQMLENLQELRIGNNSWACDCRMAWFVSWIENRKDIVRSDLSCRWAYRDDM
LRYLNSTNCKPPQLIKSSPLSLHRLQTDALLECKFAGNPAPSITWITPTRNVFHWNPDSS
PPDIFQKHGIAHDQYYRPLDYSNSRVKIRDDGSLFIADIHREDSGTYLCLASNPSANATA
EVVLNIDPMTMLEIKIYSLLFGAMCALSFLGLTLLVQALRYIFYRYRLLETCCSCCTCVN
RDAPRTRQIYHMLDNIEQYKRQQLEKLRENYAVQVHRIKENCTQQMEWIQSSYSTQAAHL
RNIRDIGTNHLTSMKDQYYDQVKRVREYSTCQLNWVRENYVFQRNKIRKFSAHQILRLRE
SYKYQQQTLNKVLENLPSLYFENCRSGSCGRSDSMAFDPDVEVIDMYLKTKIEKLARLPP
HFDDESKVSVYYTPTERSLESRRGSLARAEPEAVHINMIERPPSCVVRVGSVVCCDGVCT
GRRPSPPLPCRPVGVLIIITISRSVTV