New model in OGS2.0 | DPOGS204608  |
---|---|
Genomic Position | scaffold1676:+ 23564-24163 |
See gene structure | |
CDS Length | 600 |
Paired RNAseq reads   | 73 |
Single RNAseq reads   | 300 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA008140 (8e-16) |
Best Drosophila hit   | CG17385 (3e-11) |
Best Human hit | zinc finger protein 341 (5e-13) |
Best NR hit (blastp)   | zinc finger protein 467 [Culex quinquefasciatus] (5e-14) |
Best NR hit (blastx)   | hypothetical protein BRAFLDRAFT_233347 [Branchiostoma floridae] (2e-19) |
GeneOntology terms    | GO:0008270 zinc ion binding GO:0045449 regulation of transcription GO:0003677 DNA binding GO:0046872 metal ion binding GO:0005634 nucleus GO:0005622 intracellular |
InterPro families    | IPR013087 Zinc finger, C2H2-type/integrase, DNA-binding IPR007087 Zinc finger, C2H2-type IPR015880 Zinc finger, C2H2-like |
Orthology group | ND |
Nucleotide sequence:
ATGGATGGCGTGATAAGGAATGACACGAGAGTAACTCTGCCAAATATCAATACGGACGTA
AACACAAGTACTGTGCACTGCAAGCAATGCGAGAACACGTTTATGAATGAAAACGACTAC
AACGAGCACAATACAAAGAAACTATGCATAAGGAAGTTCACTTGCGGCGTCTGCGATGTC
AGCTTCAAACGACGGGACCACTTGAAGCGGCACACGCTGAGTGTGCACTCCAACGTCAAT
TATTACACCTGCCCGATATGCTCAGAGAACTGTCTGCGGAAGGATTCACTCAAGAAACAC
ATAAACTTGTATCACTACGGAGAACCGAAGACGTTCAGCTGTCGCGAGTGCAGCTACGAG
TGCAAGACCTTAGACGATTTGGATATTCACAAAAGCACACATCTATTATCAGAATGGCAT
TACTGTCAACATTGTAAAATGCCGTTCAAACGCAGGGATCACATGCTGAGACACATCAAG
ACTCAACATTCAAACATGTCTGCCGAGTGTCCGTTGTGCAAGCAAGTGTTTAAACGGACA
GATCACGTTTCGAGACACATCCGTGAAAAACACAGACACGACATACTCAATGCACAGTAA
Protein sequence:
MDGVIRNDTRVTLPNINTDVNTSTVHCKQCENTFMNENDYNEHNTKKLCIRKFTCGVCDV
SFKRRDHLKRHTLSVHSNVNYYTCPICSENCLRKDSLKKHINLYHYGEPKTFSCRECSYE
CKTLDDLDIHKSTHLLSEWHYCQHCKMPFKRRDHMLRHIKTQHSNMSAECPLCKQVFKRT
DHVSRHIREKHRHDILNAQ