New model in OGS2.0 | DPOGS214140  |
---|---|
Genomic Position | scaffold433:+ 33410-43809 |
See gene structure | |
CDS Length | 1953 |
Paired RNAseq reads   | 1981 |
Single RNAseq reads   | 5130 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA006185 (0.0) |
Best Drosophila hit   | fatty acid (long chain) transport protein, isoform B (0.0) |
Best Human hit | long-chain fatty acid transport protein 1 (2e-142) |
Best NR hit (blastp)   | fatty acid transport protein [Bombyx mori] (0.0) |
Best NR hit (blastx)   | fatty acid transport protein [Bombyx mori] (0.0) |
GeneOntology terms    | GO:0005324 long-chain fatty acid transporter activity GO:0015909 long-chain fatty acid transport GO:0005886 plasma membrane GO:0003824 catalytic activity GO:0008152 metabolic process |
InterPro families    | IPR020845 AMP-binding, conserved site IPR000873 AMP-dependent synthetase/ligase |
Orthology group | MCL10149 |
Nucleotide sequence:
ATGTTGGCAATAATCAGTGTCGGGGTTTCGCTACTAGCGGCTTTAGTGTATATTGGAATT
ATAAAAACACTTCTAGTGTCTGTCGTTTTAGGTGTTCTCTATACACTTAAATATCACAAA
CGATGGTGCTATATCGCTATTAAAACTGCTCCGAGAGATCTGAGAGCCCTTTATTGTTAT
ATAAAGATATTGTTAATAACAAGAAAATTCATGAGAAAAGATTACACTGTACCAGACATA
TTCCATGAAATTGTGGTGAAGCATCCTAAAAAACCATGCTTCCTGTTACAAGATGAAGTA
TGGACTTTTGAAGAGGTTGAAGAGTTCAGTTTGAGAGTATCAGCTGTACTAAAATTAAAA
GGTGTTAAAAAAGGTGACATTGTCGGTCTTCTTGTGAACAACAGTCCTCAAATGCCAGCA
TTATGGCTCGGCAATGCACGGCTAGGTGGTATTACACCACTCATCAATACAAATCAGCGA
GGAAATACTCTGATACACTCAATATCCATAGCCAAATGCAATGTCCTCATATTTTCTGAT
GAATATTTGTCAGTGATCCAGGACATATCAAGTCAGCTTGATCCTAAGTTAAAGTTACTT
AAGTTTACACATCGTCCTTTAAATAAAAATCCCGTTGAAGTGAATGGTAGTGGTGATGGT
ATTGAAGATTTGACGGATTTACTTGAAAGGACACCTCCTGCACCATGGACCTTGGCTGAT
GCCAATGGATTTCAAGGAAGACTATTATACATTTTCACATCTGGTACAACCGGTCTACCA
AAAGCAGCTGTCATATCGAATTCAAGATTTGTATTCATGGCGTGTGGTCTCCACAACTTC
AGATTGAATTCTTCAGATGTTGTGTACTGTCCTCTGCCTTTATATCACACAGCGGGAGGT
GTAGTTAGTGTGGGCCAAGCCTTAATATTTGGCTGTACAGTCGTACTAAAAACCAAATTC
TCTGCTTCCCAATATTTCCCAGATTGTGTGAAATATAAGGCTACGGCAGCTCACTACATA
GGAGAGATGTGTCGCTACGTGCTTGCTACTCCACCGTCCCCGGCGGACAGGAATCACAGA
GTACGGCTCATATACGGCAACGGTTTGAGGCCACAGATCTGGACAGAGTTTGTGAATCGT
TTCAATATCCAATATGTCACTGAGTTCTACGGAGCGACGGAAGGGAATGCTAATATTGCT
AACTCTGACGGTACTCCTGGCGCAATTGGCTTCATTTCCCGCATCTTTCCGGCCGTATAT
CCAATCGCTATAATAAAGGTTGATCAGGAAACTGGGGAACCCATTAGAGACTCCAGAGGA
CTCTGTCAGTTGGCTCAACCGAACGAGCCGGGCGTCTTCATCGGGAAGATATCACCAAAC
AATCCGACTAGGGAATTCCTCGGATACGTGGACCGCAGCGCCTCGGATAAGAAGGTGGTC
AGAGACGTGTTCACTCATGGGGACTCCGCCTTCATATCCGGTGACATCCTAGTGGCTGAT
GAGTTCGGCTACTTATATTTCCGCGATCGTACCGGAGACACGTTCAGGTGGCGCGGAGAG
AACGTCAGCACCAGTGAGGTGGAGGCCGCCATCTCTAACGTCGCCAACCATAGAGACGCT
GTTGTCTATGGTGTTATGGTTCCAAACACCGAGGGTCGTGCTGGGATGTGTGGCATCGTT
GACACTGACGGTACCCTGGACCTGGACAAGCTGGCGAAGGACCTATCAAACGACCTTCCT
CCATATGCCCGACCTATCTTCCTTAGAGTTATGACCAGTCTAGATATGACCGGTACGTTT
AAAATGAAGAAGACAGATCTCCAGAAGGAAGGCTTCGACCCCAGCAAGGCTAAGGGCGAC
AAACTGTACTACCTGGATATGAAACAATGCAAGTATCTCCCGCTCCAAGAAGACGAGTAC
AACAAAATTATAGATGGACGTATCAGGATATGA
Protein sequence:
MLAIISVGVSLLAALVYIGIIKTLLVSVVLGVLYTLKYHKRWCYIAIKTAPRDLRALYCY
IKILLITRKFMRKDYTVPDIFHEIVVKHPKKPCFLLQDEVWTFEEVEEFSLRVSAVLKLK
GVKKGDIVGLLVNNSPQMPALWLGNARLGGITPLINTNQRGNTLIHSISIAKCNVLIFSD
EYLSVIQDISSQLDPKLKLLKFTHRPLNKNPVEVNGSGDGIEDLTDLLERTPPAPWTLAD
ANGFQGRLLYIFTSGTTGLPKAAVISNSRFVFMACGLHNFRLNSSDVVYCPLPLYHTAGG
VVSVGQALIFGCTVVLKTKFSASQYFPDCVKYKATAAHYIGEMCRYVLATPPSPADRNHR
VRLIYGNGLRPQIWTEFVNRFNIQYVTEFYGATEGNANIANSDGTPGAIGFISRIFPAVY
PIAIIKVDQETGEPIRDSRGLCQLAQPNEPGVFIGKISPNNPTREFLGYVDRSASDKKVV
RDVFTHGDSAFISGDILVADEFGYLYFRDRTGDTFRWRGENVSTSEVEAAISNVANHRDA
VVYGVMVPNTEGRAGMCGIVDTDGTLDLDKLAKDLSNDLPPYARPIFLRVMTSLDMTGTF
KMKKTDLQKEGFDPSKAKGDKLYYLDMKQCKYLPLQEDEYNKIIDGRIRI