| New model in OGS2.0 | DPOGS212089 |
|---|---|
| Genomic Position | scaffold1562:+ 12442-14842 |
| See gene structure | |
| CDS Length | 1131 |
| Paired RNAseq reads | 771 |
| Single RNAseq reads | 2341 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006722 (3e-120) |
| Best Drosophila hit | mitochondrial ribosomal protein S22 (1e-49) |
| Best Human hit | 28S ribosomal protein S22, mitochondrial (8e-37) |
| Best NR hit (blastp) | PREDICTED: similar to AGAP007519-PA [Tribolium castaneum] (2e-68) |
| Best NR hit (blastx) | mitochondrial 28S ribosomal protein S22 [Culex quinquefasciatus] (9e-68) |
| GeneOntology terms | GO:0006412 translation GO:0005763 mitochondrial small ribosomal subunit GO:0003735 structural constituent of ribosome |
| InterPro families | IPR019374 Ribosomal protein S22, mitochondrial |
| Orthology group | MCL13286 |
Nucleotide sequence:
ATGTCCTTATTAAAATTGTGTCAGAGTAGTACCAAAACCATAGTCTTTAAATGTACAGAA
TCACAGCGCCTGTATATTTCTGCCAGAAAATTGAGTATCGTACCTTCAATTTATGATGGC
GAAAATCCTGCGCCCAAATTTTTCTCCTCGGGTGTCCAAATAATTCTTAAGAGATTAACA
AGACCTAATTTCGAAAAAGTATTTCGGAAAAGAACAAATAGCAACATATCTGTATTAAGG
ACTCCCGTGTATAAATTTCTAACAGACGAAGAACTAAAAATTGAACAGTCCAATGCATAC
AAAAGTGCTGAAAGGCTATTACAAATGCCACCAGTTGTAAAGGTACAAGAACCCGTTGAT
GACATTTTATCGAAAGATCCAGCGTTAGTCGGATATGATTCATCAACTTATTTGTTCACC
GATATAACTTATGGTGTTGCAAATGAGCACAGGTTAATAATACAAAGAGAACCGGATGGA
ACTCTAAGAAGCTGTGACCATGATGTTAGAAAAAAACTGAATCAAATATATTTTCCCATG
CAGGGACGTAAATTGAGGGATCCCTTAGTATTTTCTGATCCTGAAAAGTTCAACAGCTTA
TTGGAGAGACAGAAATATGAATATATATTAGACCGAGCCTGTGTCCAGTATGAGCCGGAT
GATCCGCAGTACCAGAAATTAACGAGCATCACTTATCAGCATGTAGATATGAATAATCAG
TATAATTTAATTCGATCGACTCGTCATTTCGGTCCTCTAGCATTTTACTTAACCTGGCAT
GATAGTATTGACAATCTTATGCTAGAAATGGTACAGACTGGTATTATTCGTGAAGCTGTC
CTACTAATGTCACTTCGGCAAGCTATCAAAGAAGATCTGGTCAATGGTGAAGAGAGTACT
GCTTTGGTGTCAGAGATATTACCAACTCGTATACAACTGAGAAAACCTGATTATGTCTCC
GAGGATGACATCCAACTAGATACTAAATGTATGGAATGTCTTGACAAATACATAAATAAC
AACTCGGCTATGAAGAGTCAACAAGGGCTGGCTTTACAGGGCTTCAGGGAATATTACCAA
CAGTTGATAGAAATCAGTAGGGGATTGCAGAAGGCCCATGGAAGTGCTTAA
Protein sequence:
MSLLKLCQSSTKTIVFKCTESQRLYISARKLSIVPSIYDGENPAPKFFSSGVQIILKRLT
RPNFEKVFRKRTNSNISVLRTPVYKFLTDEELKIEQSNAYKSAERLLQMPPVVKVQEPVD
DILSKDPALVGYDSSTYLFTDITYGVANEHRLIIQREPDGTLRSCDHDVRKKLNQIYFPM
QGRKLRDPLVFSDPEKFNSLLERQKYEYILDRACVQYEPDDPQYQKLTSITYQHVDMNNQ
YNLIRSTRHFGPLAFYLTWHDSIDNLMLEMVQTGIIREAVLLMSLRQAIKEDLVNGEEST
ALVSEILPTRIQLRKPDYVSEDDIQLDTKCMECLDKYINNNSAMKSQQGLALQGFREYYQ
QLIEISRGLQKAHGSA