| New model in OGS2.0 | DPOGS200380 |
|---|---|
| Genomic Position | scaffold339:+ 34654-35981 |
| See gene structure | |
| CDS Length | 837 |
| Paired RNAseq reads | 204 |
| Single RNAseq reads | 565 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007222 (2e-83) |
| Best Drosophila hit | CG13773 (5e-22) |
| Best Human hit | DNA-directed RNA polymerase I subunit RPA43 (2e-20) |
| Best NR hit (blastp) | RPA43_N protein [Bombyx mori] (1e-83) |
| Best NR hit (blastx) | RPA43_N protein [Bombyx mori] (3e-82) |
| GeneOntology terms | GO:0003899 DNA-directed RNA polymerase activity GO:0006350 transcription |
| InterPro families | IPR005576 RNA polymerase Rpb7, N-terminal |
| Orthology group | MCL15555 |
Nucleotide sequence:
ATGTCTACTATAATTAAATTTGAATTGAAGGAGCTCCGAGAGTTAGCAAATGACAAAAAA
TCTTGTGTTATTGAAAAAAAGGTTATCCAAAATTTAGCGTTACAGCCATGGTGTCTTGGT
AACTTAAAGGACTCCATTAAAAACTTGTTAGATTATAAAATAGGCAAATTTGACAAAGAA
TTCAATGGAATTCTCATAAGCTACAAAAATCTACGAATACTACAAAACATAGGTGCGATC
CGTAATGACAATGCTGATATACATTTTCAAGTTCAGGCAGACTACTTCCTGTTTCGTCCT
TATGTGGGAGCAACTTTAAAGGGGGTTGTTAATAAAAAGAGTGCAACACATCTTGCAATT
CTGGTACATAGGGTTTTTAATGTAGTTATTCCGCGACCAACCGAGGAACCTGGCAATTAT
TGGAGTGGATCTAACATTGAGGAGGGACAAGAAGTAGTGTTCCAGATTGTTGTTTTGGAT
CTATATGGAGCTTTACCTTATATCAGGGGAAAGCTAGACGAGCAGTGGCTAAAAGTACTA
CAAGATGGTGATGACGAAATAGAAATTAAAAGAACAAAACCGCTGAACATATCTTATGTT
GATTTTGACAAGACGAAACCAAAGTATGCAAATGAAAAATCACTAAACTCGTCGGAAACT
AATACAGCCGAAAACAGCCACAGTAATGACAAAACTGAAAATAATGTTAAGCAAGATAAC
AACATAACAGAAAAAATTAAAAATAAAAGAAGAAGCAAGATAAATGACCTCGAAGAACAA
TATTCAGAGGACTCTGCCAATAAACCCAAGAAACGCAAAAAAGATAAACAAGAATAA
Protein sequence:
MSTIIKFELKELRELANDKKSCVIEKKVIQNLALQPWCLGNLKDSIKNLLDYKIGKFDKE
FNGILISYKNLRILQNIGAIRNDNADIHFQVQADYFLFRPYVGATLKGVVNKKSATHLAI
LVHRVFNVVIPRPTEEPGNYWSGSNIEEGQEVVFQIVVLDLYGALPYIRGKLDEQWLKVL
QDGDDEIEIKRTKPLNISYVDFDKTKPKYANEKSLNSSETNTAENSHSNDKTENNVKQDN
NITEKIKNKRRSKINDLEEQYSEDSANKPKKRKKDKQE