New model in OGS2.0 | DPOGS204687  |
---|---|
Genomic Position | scaffold1112:+ 2622-10057 |
See gene structure | |
CDS Length | 2775 |
Paired RNAseq reads   | 70 |
Single RNAseq reads   | 220 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA010135 (0.0) |
Best Drosophila hit   | NMDA receptor 1 (0.0) |
Best Human hit | glutamate [NMDA] receptor subunit zeta-1 isoform NR1-3 precursor (0.0) |
Best NR hit (blastp)   | PREDICTED: similar to NMDA-type glutamate receptor 1 [Tribolium castaneum] (0.0) |
Best NR hit (blastx)   | PREDICTED: similar to NMDA-type glutamate receptor 1 [Tribolium castaneum] (0.0) |
GeneOntology terms    | GO:0004970 ionotropic glutamate receptor activity GO:0007268 synaptic transmission GO:0007616 long-term memory GO:0008355 olfactory learning GO:0017146 N-methyl-D-aspartate selective glutamate receptor complex GO:0035235 ionotropic glutamate receptor signaling pathway GO:0042391 regulation of membrane potential GO:0045211 postsynaptic membrane GO:0055074 calcium ion homeostasis |
InterPro families    | IPR001320 Ionotropic glutamate receptor IPR019594 Glutamate receptor, L-glutamate/glycine-binding IPR001828 Extracellular ligand-binding receptor IPR001638 Extracellular solute-binding protein, family 3 IPR018882 Calmodulin-binding domain C0, NMDA receptor, NR1 subunit IPR001508 NMDA receptor |
Orthology group | MCL15528 |
Nucleotide sequence:
ATGTTCTGGATATTGTTAGTGTGCAGCCTCTGTAGCCTCGTCAACGCAGATGTAGACAGA
CGAAGATATTCCAATCCTACATATTATAATGTGGGCGGAGTACTCTCCAGTAATGAGTCT
ATAGCTTTCTTTAAGGATACTATATCAAACTTAAACTTCAAAGACAAATATGTTCCCCGC
GGAGTTACCTATCATGACTATTCTATACTTATGGATCCAAACCCTATAAAAACAGCCCTC
AATGTTTGCAAAGATCTCATTGCACATCGAGTTTACGCGGTGGTCGTGTCTCATCCGTTG
ACAGGAGATCTTTCTCCCGCAGCTGTATCGTACACCAGCGGCTTTTACCACATCCCAGTT
ATTGGTATATCGTCAAGAGATTCTGCTTTCTCTGATAAGAATATACACGTGTCATTTTTG
CGTACAGTCCCACCGTACTCTCATCAGGCGGATGTGTGGGTGGATGTATTAAAACACTTT
AATTACATGAAGGTTATCGTCATTCACAGTTCTGATACCGACGGTCGTGCTATACTGGGA
AGATTCCAAACAACATCTCAAAGTATTGATGAGGATGTGGATCGTAAAGTTTTTGTAGAA
CAGGTTATAGAGTTCGAGCCAGGCCTAGACTCGTTTAGTGACAAACTTATTGAAGTTAAA
AGTGCACAAGCCCGAGTTTTCCTAATGTATGCCAGTAAGACAGATGCGGAGATAATATTC
CGTGATGCGACATACCTTAATATGACGACGACGGGATACGTGTGGATAGTGACAGAGCAG
GCCCTGGATGCAGCCAACGCTCCCGAGGGATTGCTGGGCTTGAGGCTTGTGAATGCCACA
AATGAACATGCTCACATACAGGATTCGATTTACGTATTAGCATCAGCGATACGGGACATG
AATACTTCAGAGGAAATCAACGCTCCTCCATCAGATTGTGATAACTCCGGGTCCATCTGG
ACCACTGGGAGACTGTTGTTCGATTACATCCGCAAACAGCGCTTGGAGAACGGTGCCACT
GGCCATGTGGCGTTTGATGATCACGGAGACAGGGTCCACGCGGAGTACGACATGGTGAAT
GTAAGAGCTCAGGGCGAACACGTTGCTGTTGGGAAATACTTCTATTCGAAGGATACACAA
AAAATGCGGTTGGAGCTTAAAGAACATGAAATAATTTGGATGGGACGGAGTTCCACAAAA
CCGGAGGGATTTATGATACCGACCCATTTAAAGGTTCTAACAATTGAGGAAAAACCTTTT
GTTTACGCTCGACGAGTAGACGATGAAACGGAATGTTTTACCGAAGAAATATTTTGTCCT
CACTATAATACAAATCAACTTTATTGCTGTAAGGGCTTCTGTATGGACCTTCTCCGATAT
TTATCTAAAGCTATTAATTTTACTTACTCCTTGGCTCTTTCACCGGACGGACAGTTCGGA
AACTATATCATACGTAACTTTTCGCAACCGGGAGCTAAGAAGGAATGGACTGGGCTTATC
GGAGAATTGGTTTATGAAAGGGCGGACATGATAGTAGCTCCATTAACTATAAACCCTGAG
CGAGCTGAATTTATAGAGTTCAGCAAACCATTCAAATATCAGGGCATAACAATTTTGGAA
AAAAAGCCTTCAAGGTCATCAACGTTGGTATCGTTTTTGCAACCATTTTCAAACACATTA
TGGATACTGGTTATGGTATCAGTACACGTGGTCGCACTAGTACTGTATCTGTTAGATAGA
TTCTCACCCTTCGGAAGATTTAAACTAGCTCATATAGACGGCACCGAGGAAGATGCTCTG
AACCTGTCAAGCGCCATATGGTTTGCTTGGGGCGTGTTATTGAACAGTGGAATTGGGGAA
GGAACACCACGTAGTTTCTCAGCCCGAGTCCTTGGTATGGTATGGGCCGGGTTTGCTATG
ATAATTGTCGCATCATACACAGCCAACTTAGCCGCTTTTCTTGTGTTAGAAAGACCTAAG
ACTAAATTAACTGGAATTAATGACGCGAGGTTGCGTAATACCATGGAGAATTTAACTTGC
GCTACGGTCAAAGGATCAGCCGTGGACATGTACTTCCGGAGACAGGTTGAATTATCGAAC
ATGTATAGGACCATGGAGGCAAATAACTACGACAACGCTGAACAAGCCATACAAGATGTA
AAAAACGGGAAGCTTATGGCATTCATCTGGGATTCGTCGAGATTGGAATTCGAAGCTGCC
CAAGATTGTGAGCTGGTGACCGCCGGCGAGCTCTTTGGCAGATCTGGTTATGGAGTGGGA
CTACAGAAGGGTTCACCATGGGCCGATCTTGTCACATTAGCCATTTTGGATTTTCACGAA
AGTGGCATCATGGAGTCTCTTGATAATCAATGGATACTTCGAAATAACATGCTGAATTGT
GAGGAGAACGAAAAGACGCCGAACACACTGGGTTTAAAAAACATGGCCGGAGTTTTCATA
CTGGTGTTGGCGGGCATCGTCGGCGGTATAGTTCTCATCGTTATAGAAGTTGTGTACAAA
CGGCACCAGATCAAAAAACAGAAGAGGATGGAGATAGCTCGCCACGCCGCGGACAGATGG
CGCGGCGCCGTTGAGAAACGTAAGACGTTGAGAGCTGCCATATTGCCGTCGCAGCGACGC
GCGAAATCGAACGGTGTGAAAGAGACGGGGAGTATCAGTCTCGCTGTTGATAGAGGAGTG
CGGCGGCGCGACGAACCGAGGATACCGCGTTATATGCCAGCCTATACACCTGATGTATCT
CATCTTGTGGTTTAA
Protein sequence:
MFWILLVCSLCSLVNADVDRRRYSNPTYYNVGGVLSSNESIAFFKDTISNLNFKDKYVPR
GVTYHDYSILMDPNPIKTALNVCKDLIAHRVYAVVVSHPLTGDLSPAAVSYTSGFYHIPV
IGISSRDSAFSDKNIHVSFLRTVPPYSHQADVWVDVLKHFNYMKVIVIHSSDTDGRAILG
RFQTTSQSIDEDVDRKVFVEQVIEFEPGLDSFSDKLIEVKSAQARVFLMYASKTDAEIIF
RDATYLNMTTTGYVWIVTEQALDAANAPEGLLGLRLVNATNEHAHIQDSIYVLASAIRDM
NTSEEINAPPSDCDNSGSIWTTGRLLFDYIRKQRLENGATGHVAFDDHGDRVHAEYDMVN
VRAQGEHVAVGKYFYSKDTQKMRLELKEHEIIWMGRSSTKPEGFMIPTHLKVLTIEEKPF
VYARRVDDETECFTEEIFCPHYNTNQLYCCKGFCMDLLRYLSKAINFTYSLALSPDGQFG
NYIIRNFSQPGAKKEWTGLIGELVYERADMIVAPLTINPERAEFIEFSKPFKYQGITILE
KKPSRSSTLVSFLQPFSNTLWILVMVSVHVVALVLYLLDRFSPFGRFKLAHIDGTEEDAL
NLSSAIWFAWGVLLNSGIGEGTPRSFSARVLGMVWAGFAMIIVASYTANLAAFLVLERPK
TKLTGINDARLRNTMENLTCATVKGSAVDMYFRRQVELSNMYRTMEANNYDNAEQAIQDV
KNGKLMAFIWDSSRLEFEAAQDCELVTAGELFGRSGYGVGLQKGSPWADLVTLAILDFHE
SGIMESLDNQWILRNNMLNCEENEKTPNTLGLKNMAGVFILVLAGIVGGIVLIVIEVVYK
RHQIKKQKRMEIARHAADRWRGAVEKRKTLRAAILPSQRRAKSNGVKETGSISLAVDRGV
RRRDEPRIPRYMPAYTPDVSHLVV