| New model in OGS2.0 | DPOGS204689 |
|---|---|
| Genomic Position | scaffold1112:+ 19838-25279 |
| See gene structure | |
| CDS Length | 1263 |
| Paired RNAseq reads | 1287 |
| Single RNAseq reads | 4422 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010136 (2e-143) |
| Best Drosophila hit | regena, isoform A (1e-67) |
| Best Human hit | CCR4-NOT transcription complex subunit 2 (7e-89) |
| Best NR hit (blastp) | PREDICTED: similar to CCR4-NOT transcription complex subunit 2 (CCR4-associated factor 2) [Apis mellifera] (2e-133) |
| Best NR hit (blastx) | PREDICTED: similar to conserved hypothetical protein [Nasonia vitripennis] (5e-125) |
| GeneOntology terms | GO:0005634 nucleus GO:0030528 transcription regulator activity |
| InterPro families | IPR007282 NOT2/NOT3/NOT5 |
| Orthology group | MCL13403 |
Nucleotide sequence:
ATGTGGCGTTCGACAAATCCGAGTGAAATTATTATAATTTATTTTAGCTTCTTAAAGATG
TATAAAGTTATGGCAAACTTGAATTTCCAACAAGCTCCTAGAAGCCTAGCAAGTGGCGGG
GTCGGTGGACGGGTTGGTTCAGGTTTGGTTGGCGGAGTATCAGGACATGTGACACCGACA
TTTGGTGGCGCCCTGTCACCAGGACGGGGCTCCACTGCGATGCCAGGGGGCGCACCACCC
TCAATGGCATCTAGATCTACATTATTTGGACAGCGAGCATTTGCTGACCGTAGAGTACCT
ATACCGACACCACTATCACAAGCTAACTCAAATTCTATGTCAAGTATGGCGAATCTCTCC
CGTTTTAATGCGAACTATCATTCCGTGTTCGGCGAGGGCGGTGACACTTCAACACCGCCA
CTGCTTGACCTCAGCGAGTTTCCATCACTAACGGCCCGGGGTGCCGGCGACCAAGCGCCC
GCGGCTGCGCCCCCACCACCCGGCTCAAAGCCCTACGTTGGTATGGTCAAACAGCCAACG
TCGGAGCAGTCTGAATTCACTATGTCTTCAGAAGACTTCCCTGCCTTACCCGGCACATCC
ACGGGAGCTGCGCCTCCTGACAAGCCCACGGATTACACTCATACAGACAAACCTAGAAAA
GGCATACAAACCTCCCCTGACGGCAAAGTAACAAATATACCAGAGACAATGATTCCCAAT
CAGTTTGGGATAGTGGGTCTATTGACATTTATAAGGGCTGCCGAGTCGGACCCCAGTCTA
GTCTCGTTGGCACTGGGTCAAGACCTCACAGCCCTGGGCCTCAATCTCAATTCTCCAGAC
AATCTATACCTTACCTTCGCAGGACCTTGGGCTGATACGCCTTGCAGGCCACAGGACATG
GATTACCACGTGCCTCCAGAGTACCTGATAAATGGGTCTATTAGAGAAAAGCTCGCACCC
TTACGACTGAGTCGGTATAAGGAAGACTTATTATTTTATCTATTCTACTGCTTCGTTGGC
GATGTACTTCAAATTGCGGCAGCGGCGGAACTCTACAACCGCGAGTGGAGGTATCACATG
GAAGAGAAGGTCTGGATATCTCAAGCCCCCGGCATGCCCATGGTTGAGAAAACATCCACC
TACGAACGCGGCACTTACTACTTCTTTGACGCGCACAATTGGCGCAAGGTGGCGAAAGAA
TTCCACTTAGACTACAGCAAGTTGGAGGGTCGGCCGCAATTGCCGCCGCATGTGCTCACG
TAG
Protein sequence:
MWRSTNPSEIIIIYFSFLKMYKVMANLNFQQAPRSLASGGVGGRVGSGLVGGVSGHVTPT
FGGALSPGRGSTAMPGGAPPSMASRSTLFGQRAFADRRVPIPTPLSQANSNSMSSMANLS
RFNANYHSVFGEGGDTSTPPLLDLSEFPSLTARGAGDQAPAAAPPPPGSKPYVGMVKQPT
SEQSEFTMSSEDFPALPGTSTGAAPPDKPTDYTHTDKPRKGIQTSPDGKVTNIPETMIPN
QFGIVGLLTFIRAAESDPSLVSLALGQDLTALGLNLNSPDNLYLTFAGPWADTPCRPQDM
DYHVPPEYLINGSIREKLAPLRLSRYKEDLLFYLFYCFVGDVLQIAAAAELYNREWRYHM
EEKVWISQAPGMPMVEKTSTYERGTYYFFDAHNWRKVAKEFHLDYSKLEGRPQLPPHVLT