| New model in OGS2.0 | DPOGS204150 |
|---|---|
| Genomic Position | scaffold1120:- 48958-63713 |
| See gene structure | |
| CDS Length | 2271 |
| Paired RNAseq reads | 104 |
| Single RNAseq reads | 249 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005029 (0.0) |
| Best Drosophila hit | CG34113, isoform P (1e-164) |
| Best Human hit | hemicentin-1 precursor (4e-14) |
| Best NR hit (blastp) | PREDICTED: similar to CG34113 CG34113-PP [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to CG34113 CG34113-PP [Tribolium castaneum] (0.0) |
| GeneOntology terms | GO:0003674 molecular_function GO:0005575 cellular_component GO:0008150 biological_process |
| InterPro families | IPR007110 Immunoglobulin-like IPR003599 Immunoglobulin subtype IPR003598 Immunoglobulin subtype 2 IPR013098 Immunoglobulin I-set IPR013162 CD80-like, immunoglobulin C2-set IPR009134 Tyrosine-protein kinase, vascular endothelial growth factor receptor (VEGFR), N-terminal IPR013783 Immunoglobulin-like fold |
| Orthology group | MCL12328 |
Nucleotide sequence:
ATGGTACTTTGGTTTAGAAAAAGCGGTGGTAAACCAATTTATAGCTTTGATGTGAGGGGC
AGATCATTCAATAAAGCCCTTCAATGGTCAGATCCTGGTGCTTTTGGACCTCGAGCATAT
TTTGTGACAGTAGCACGACCTGCAGCTCTAACTTTGAGTTCCGTTCAATTGGACGATGAA
GGCACCTACCGGTGTAGAGTTGACTTTAAAAATTCTCCCACGAGGAATTTTCAAATACGA
CTCATCGTCATAGTACCGCCGCACCAAATGTTGTTGTATGATAAATCTGGCGGTGACATT
TCTGGCGTGTTCGGGCCCGTGGAAGAAGGATCAGCTCTTGTACTTATCTGTGAAGTTCGT
GGAGGAAAACCAGAACCAGTAGTATCTTGGCTGATAGACGGTACTCCAGCAACACAGTAT
ATTGGCGAAAAGACAGACACACACGTGGTTGTAAATAGATTGGAGCTTCAGCACGTGAGG
AGAGGAGACCTAAATAAAACTTTTAAATGTAGAGCAGGCAACACACATCTTGTGCCCCCA
CAAGAGAAAGCGGTTAGGCTGGAGATGAATTTGGCACCACTGTCGGTATCACTTTTAAAC
CGGCCACAGAAATTGCTAGCGGGTGCAACGACAACGTTACGTTGTGTGGCGGAAGGCAGT
CGCCCGCCAGCAGAAGTAACTTGGTACAAGGATAACAGAAGCTTCGAGAAGAATGAAGTT
AGTGATCATTCAAATGAAACATGGACAGTCAGTACACTAGTATTCACTCCCACGCCGGAA
GATCACGGCTTGATCGTGAAATGTGTGGCTGTAAATGTTGCGCTTCCCAGCAAATCGATT
GACGACCAACTTAAACTGAATGTTGTATACAGCCCTTTGGTGTCTTTGACACTCGGCAGC
ACACTAAATCCTCATGACATCAAGGAGGGCGATGATGTATACTTTGAATGTAATGTAAAA
GCAAACCCGCGGGAGCATAGAATAACATGGTATCACAATGACAGACAGGTGACACAGAAC
ATGACATCTGGTATAATCCTGAGCACCCGTTCGCTGGTTTTACAAAGAGTGACGCGACGG
GAAGCCGGCCAATATTCATGCAGGGCTGCGAATGCGAGGGGGGAAACTTCTAGCGAGACA
GTGTTACTAAGGGTGCAATATGCACCTGTCTGTGGGATGTCATCACCTAGGGTGGTTGGA
GCTGCTTTGGATGAGTCTCTTCAAGTCCGTTGTTCTGTGAATGCCGACCCAGCTGATGTC
GTATTCCTTTGGCAATTTAACAATAGTGGAGAGAGTTTCAATGTATCACCGGCAAGATAT
GGTACGTTGAATGGCAGCACCAGCGAATTAAGGTACACACCCGCGAGCGAAAGAGACTAC
GGCGCCCTCACGTGTCGAGGAACAAACAGTGTCGGTCAACAGGCACAGCCTTGTGTCTTT
CAGATTGTACCGGCAGCAAGACCATCTCCACCAAGAAACTGTACAGTTTCAACTGGAAAC
AATTCAAATTGGATCGAAGACTCTATTGAAGAAGCTATTGACTATCTTGTTGTCAAATGC
GTCGCGGGATACGATGGGGGTCTACCACAACTCGTCGTTTTGGAAGCTTTGGACTCTCAT
TCTGGCGTTTTAAGGTTGAATATTACTGCTAATGAGACGAACGGAGTTGTAGTATTCCTA
GTGCCACTTGAGGTACTATGGTCGGGAGGGAAAGCGTTGCGCCTCACCGTTCATTCTAAA
AACGACAAAGGAGCCTCAGATCGAATTGTAATTCAAGCCCTGTCTTATCAAGACCCGGAG
CGACGGACAGATGGAAGCCAAAGCTTGATGTCGGGTATGTCTAGCACAGCGTTTTGGACT
ATCATCTTGACAATTTTATTTTGTACCAGCTGTGCTTTAGTTACAATTTTGTTTATCAGG
AAGAAGAGGGCTCGAGCAACGTGTAAGCAACAAACGCAGGAACTTCAACTTAACTCTGAT
GGCAGACAATATGTGGTAGCATATACGTTAAAACCACCCAAACAGGCGCAACCAGATATT
CTCAACCCACAACCTGATGGGAACTCTTTAGATTGTGGAGTGGACGCTGTCAAAAATGGG
ACTTTTCATACAAGTGAGAGCGATTCGCGAGAGCAAGCGAGTATATCCGACAAAATGTCG
ACATCCTCGAGCACAATGGCAAACAAACTAGTAACTATAAGTACCTCAACGCTCAGCAGA
CGAGAACATCTCATTGCTGAGGAAATACCAGGTCCAGAGAGTTGTGTATAA
Protein sequence:
MVLWFRKSGGKPIYSFDVRGRSFNKALQWSDPGAFGPRAYFVTVARPAALTLSSVQLDDE
GTYRCRVDFKNSPTRNFQIRLIVIVPPHQMLLYDKSGGDISGVFGPVEEGSALVLICEVR
GGKPEPVVSWLIDGTPATQYIGEKTDTHVVVNRLELQHVRRGDLNKTFKCRAGNTHLVPP
QEKAVRLEMNLAPLSVSLLNRPQKLLAGATTTLRCVAEGSRPPAEVTWYKDNRSFEKNEV
SDHSNETWTVSTLVFTPTPEDHGLIVKCVAVNVALPSKSIDDQLKLNVVYSPLVSLTLGS
TLNPHDIKEGDDVYFECNVKANPREHRITWYHNDRQVTQNMTSGIILSTRSLVLQRVTRR
EAGQYSCRAANARGETSSETVLLRVQYAPVCGMSSPRVVGAALDESLQVRCSVNADPADV
VFLWQFNNSGESFNVSPARYGTLNGSTSELRYTPASERDYGALTCRGTNSVGQQAQPCVF
QIVPAARPSPPRNCTVSTGNNSNWIEDSIEEAIDYLVVKCVAGYDGGLPQLVVLEALDSH
SGVLRLNITANETNGVVVFLVPLEVLWSGGKALRLTVHSKNDKGASDRIVIQALSYQDPE
RRTDGSQSLMSGMSSTAFWTIILTILFCTSCALVTILFIRKKRARATCKQQTQELQLNSD
GRQYVVAYTLKPPKQAQPDILNPQPDGNSLDCGVDAVKNGTFHTSESDSREQASISDKMS
TSSSTMANKLVTISTSTLSRREHLIAEEIPGPESCV