New model in OGS2.0 | DPOGS201533  |
---|---|
Genomic Position | scaffold64:+ 120116-133737 |
See gene structure | |
CDS Length | 1890 |
Paired RNAseq reads   | 1934 |
Single RNAseq reads   | 5085 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA002711 (2e-109) |
Best Drosophila hit   | lightoid, isoform B (2e-99) |
Best Human hit | ras-related protein Rab-32 (1e-83) |
Best NR hit (blastp)   | Rab-related protein [Bombyx mori] (7e-109) |
Best NR hit (blastx)   | Rab-related protein [Bombyx mori] (3e-106) |
GeneOntology terms    | GO:0006727 ommochrome biosynthetic process GO:0006856 eye pigment precursor transport GO:0005525 GTP binding GO:0008355 olfactory learning GO:0007611 learning or memory GO:0003924 GTPase activity GO:0007264 small GTPase mediated signal transduction GO:0015031 protein transport GO:0008057 eye pigment granule organization |
InterPro families    | IPR020851 Small GTPase IPR005225 Small GTP-binding protein IPR003577 Ras small GTPase, Ras type IPR003579 Ras small GTPase, Rab type IPR003578 Small GTPase, Rho type IPR002041 Ran GTPase IPR013753 Ras IPR001806 Ras GTPase |
Orthology group | MCL10543 |
Nucleotide sequence:
ATGTTGGGCGAGACTTCACCACCAGCACCCCGCGCCCCGCCACCCCCTCCCCCCAAACAG
TCCCGCCTCAAGCGCACGCTACACACGCTCCGCTCTTCGTTCAGCTCGGGCTCGCCCTTC
CACATCGCGTCGTTCGGCCGCTCCGCTACGTTCTCAGTATCGGATAGCGAGATCGCGCGG
GACGAACGCACTATGCGTAAGAAGAATAAGAAAATCCGCGCAGACGCGTCGGCCGCTTCC
TCGCGGAGCACTGACAGCTCGCCTGTCGTCGACAAAAAGAAACCCCTGGGACTGCTCAAG
AAGATGGGGAGCATAGGTAAGAGGAGGGGGGAGTGTTCTACGACACCCTCGCTCAGTGAA
ATCGAAACCGATCCGGATCCTGAACCGCAAAAGGTAACCGATCAGTGTGACAAAACGGAA
CAAAGTATCGAACCCGACACCATAAACATGGCGGGTAACGAACCAGCGGAACAAACGACA
AATATAAATAAAAACAATGAAATCACACAAAATAAAATAGAAGAACAAAAAACAGTGTTT
GATCACAATAGTCCTAAAGATCACATACCGGATATTAAACAAACTACGCCATCGGATCAA
TCCACAACAGTTGGTAAGGAAACGACAACAGACCAAAACAAAGAATCCGGAAACGGTTTA
GATCAAAACATAGAAGTAAATGAGAACGCTAAGTTCGAGAAAAACAACGACAGTGTGGAT
TCAAATAAACTTGTACACCAAACACAATCAGATCCGGAGGCATCGCCGCGAAAAAGTTCA
AGACCTCGTTTATCCATGACGGAATCGGAGCCATTCATTCCCATAGCCGTCGAACACCCT
GTGGCCATGCGGGCCTTCACTAAGGCCGCCTGGAAAAGACGCAGCAACACCGTCATAGTG
AGGCCTGTCGAGGAGCCGAGTCCGGAGGGCACTATGAAGAGGCGCATCGCATTCGTAGCT
CAAACGTCGGTGGCGCTCTCCGAGGAGCAGGACGACGACGAAGACGACGATGACGACGAG
GGAAAGGACAGCGGGGGCGAGGTGGGGTCGCTAGAGGAGGCGGTGGCGCTGGCCAGGCAG
CGGCTGGCCCAGGCCGTGCACTCGCCCGCGCCGCCGCAGTCGAGCGACAACTTTGACGCC
GAAGAGGAGGGAGGTGCGGACGCGATGCCGGCCTACGGAGACCTCATAGAGCCGGAGAAC
AAGGCCGGCAGCGACGACGAACCGTCTCACGCTACAGCCAGCGCTGAAAGGCGGGAGCAT
CTTTACAAGATCCTGGTTATTGGGGAACTTGGTACGGGGAAGACTTCAATAATCAAGCGA
TATGTCCATCAGTTCTTCAGTCAACACTACCGCGCCACCATCGGAGTGGACTTCGCTCTC
AAAGTACTTAATTGGGATGCGAATACGATAATACGCTTGCAGCTATGGGATATAGCGGGT
CAAGAGCGTTTCGGCAACATGACCCGCGTGTACTACAAGGAGGCAGTAGGCGCGTTCATA
GTTTTTGATGTATCTCGCGTAGCCACCTTCGACGCTGTTGTCAAGTGGAAGAACGATCTC
GATACTAAGGTGCAGCTTCCTGATGGTTCACCCATACCGTGCATACTGCTGGCGAATAAG
TGCGATCAACAAAAGGAAGGTATAGTGAATTCTCCCGGGAAAATGGAAGAGTACTGTCGG
GAAAAAGGCTTCGCTGGCTGGTTCGAGACATCAGCGAAAGAGAATATCAACATCGAAGAA
GCTGCTCGCTCTTTAGTTAACAAGATTCTTCTAAACGACAAGCTTCTACAAAGCAGCGAT
AAAGACGGCGAGCGTTTCGCTCTCGATCACAAGATCGCCAACGGTGAGAACAGCCGTGCA
GCTGGCAGCAGCAAGTCCTGCGCCTGCTGA
Protein sequence:
MLGETSPPAPRAPPPPPPKQSRLKRTLHTLRSSFSSGSPFHIASFGRSATFSVSDSEIAR
DERTMRKKNKKIRADASAASSRSTDSSPVVDKKKPLGLLKKMGSIGKRRGECSTTPSLSE
IETDPDPEPQKVTDQCDKTEQSIEPDTINMAGNEPAEQTTNINKNNEITQNKIEEQKTVF
DHNSPKDHIPDIKQTTPSDQSTTVGKETTTDQNKESGNGLDQNIEVNENAKFEKNNDSVD
SNKLVHQTQSDPEASPRKSSRPRLSMTESEPFIPIAVEHPVAMRAFTKAAWKRRSNTVIV
RPVEEPSPEGTMKRRIAFVAQTSVALSEEQDDDEDDDDDEGKDSGGEVGSLEEAVALARQ
RLAQAVHSPAPPQSSDNFDAEEEGGADAMPAYGDLIEPENKAGSDDEPSHATASAERREH
LYKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDANTIIRLQLWDIAG
QERFGNMTRVYYKEAVGAFIVFDVSRVATFDAVVKWKNDLDTKVQLPDGSPIPCILLANK
CDQQKEGIVNSPGKMEEYCREKGFAGWFETSAKENINIEEAARSLVNKILLNDKLLQSSD
KDGERFALDHKIANGENSRAAGSSKSCAC