Genomic Position | scaffold10610:- 1662-2069 |
---|---|
See gene structure | |
CDS Length | 408 |
Paired RNAseq reads   | 0 |
Single RNAseq reads   | 3 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | ND |
Best Drosophila hit   | ND |
Best Human hit | KRAB-A domain-containing protein 2 (5e-28) |
Best NR hit (blastp)   | PREDICTED: similar to KRAB-A domain containing 2 [Acyrthosiphon pisum] (3e-36) |
Best NR hit (blastx)   | PREDICTED: similar to KRAB-A domain containing 2 [Acyrthosiphon pisum] (7e-38) |
GeneOntology terms    | GO:0006355 regulation of transcription, DNA-dependent GO:0005622 intracellular GO:0015074 DNA integration GO:0003677 DNA binding |
InterPro families    | IPR012337 Ribonuclease H-like IPR001584 Integrase, catalytic core |
Orthology group | MCL19268 |
Nucleotide sequence:
ATGGTCTATCAAGATCATTTAACAAAATTTGCTGTTTTACGGCCACTTAAAACAAAACTA
GCTGAGGAAGTGGCTCACACTTTTTTGGACATATTTACTCTACTTAGTGCTCTAGCAAAA
CTTCAGTCTGACAACGGTAGAAAATATTCAAACCGAATTATTGACAATTTAAAAACATAT
TGGCCTACTTCAAAAATTAGTCATGGTAAACCCAGGCATGCGCAAAGTCAGGGGAGTGTG
GAAAGAGCGAATCAGGATATTGAAAATATGCTAACCACGTGGATGGAAGATAACGATAAT
TCATATTGGACTGAGGGTTTGAGATTTGTCCAACTGATGAAAAACACAGAGCTTTTGATG
CTGGTATCAAGCAATCTCCGTATGGGGCTCTTTTTGGGTGTAAAGTAA
Protein sequence:
MVYQDHLTKFAVLRPLKTKLAEEVAHTFLDIFTLLSALAKLQSDNGRKYSNRIIDNLKTY
WPTSKISHGKPRHAQSQGSVERANQDIENMLTTWMEDNDNSYWTEGLRFVQLMKNTELLM
LVSSNLRMGLFLGVK