DPGLEAN13706 in OGS1.0

Genomic Positionscaffold10610:- 1662-2069
See gene structure
CDS Length408
Paired RNAseq reads  0
Single RNAseq reads  3
Migratory profilesQuery via corresponding ESTs
Best Bmobyx hitND
Best Drosophila hit  ND
Best Human hitKRAB-A domain-containing protein 2 (5e-28)
Best NR hit (blastp)  PREDICTED: similar to KRAB-A domain containing 2 [Acyrthosiphon pisum] (3e-36)
Best NR hit (blastx)  PREDICTED: similar to KRAB-A domain containing 2 [Acyrthosiphon pisum] (7e-38)
GeneOntology terms


  
GO:0006355 regulation of transcription, DNA-dependent
GO:0005622 intracellular
GO:0015074 DNA integration
GO:0003677 DNA binding
InterPro families
  
IPR012337 Ribonuclease H-like
IPR001584 Integrase, catalytic core
Orthology groupMCL19268

Nucleotide sequence:

ATGGTCTATCAAGATCATTTAACAAAATTTGCTGTTTTACGGCCACTTAAAACAAAACTA
GCTGAGGAAGTGGCTCACACTTTTTTGGACATATTTACTCTACTTAGTGCTCTAGCAAAA
CTTCAGTCTGACAACGGTAGAAAATATTCAAACCGAATTATTGACAATTTAAAAACATAT
TGGCCTACTTCAAAAATTAGTCATGGTAAACCCAGGCATGCGCAAAGTCAGGGGAGTGTG
GAAAGAGCGAATCAGGATATTGAAAATATGCTAACCACGTGGATGGAAGATAACGATAAT
TCATATTGGACTGAGGGTTTGAGATTTGTCCAACTGATGAAAAACACAGAGCTTTTGATG
CTGGTATCAAGCAATCTCCGTATGGGGCTCTTTTTGGGTGTAAAGTAA

Protein sequence:

MVYQDHLTKFAVLRPLKTKLAEEVAHTFLDIFTLLSALAKLQSDNGRKYSNRIIDNLKTY
WPTSKISHGKPRHAQSQGSVERANQDIENMLTTWMEDNDNSYWTEGLRFVQLMKNTELLM
LVSSNLRMGLFLGVK